Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx2P48379 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.33□□□□□ -0.28
Rfx2P48379 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.33□□□□□ -0.28
Rfx2P48379 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx2P48379 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.33□□□□□ -0.28
Rfx2P48379 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.33□□□□□ -0.28
Rfx2P48379 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.33□□□□□ -0.28
Rfx2P48379 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.33□□□□□ -0.28
Rfx2P48379 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.33□□□□□ -0.28
Rfx2P48379 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Rfx2P48379 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.33□□□□□ -0.28
Rfx2P48379 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx2P48379 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx2P48379 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx2P48379 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx2P48379 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx2P48379 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.33□□□□□ -0.28
Rfx2P48379 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx2P48379 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.33□□□□□ -0.28
Rfx2P48379 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx2P48379 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx2P48379 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx2P48379 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rfx2P48379 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx2P48379 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx2P48379 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx2P48379 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx2P48379 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Rfx2P48379 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx2P48379 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx2P48379 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx2P48379 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.32□□□□□ -0.28
Rfx2P48379 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx2P48379 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx2P48379 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx2P48379 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx2P48379 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx2P48379 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx2P48379 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.32□□□□□ -0.28
Rfx2P48379 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Rfx2P48379 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx2P48379 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx2P48379 Gm14381-201ENSMUST00000122105 414 ntBASIC13.32□□□□□ -0.28
Rfx2P48379 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx2P48379 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.32□□□□□ -0.28
Rfx2P48379 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rfx2P48379 Gm2991-201ENSMUST00000173338 480 ntBASIC13.32□□□□□ -0.28
Rfx2P48379 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx2P48379 Gm27320-201ENSMUST00000184892 109 ntBASIC13.32□□□□□ -0.28
Rfx2P48379 Gm38158-201ENSMUST00000194617 339 ntBASIC13.32□□□□□ -0.28
Rfx2P48379 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.32□□□□□ -0.28
Rfx2P48379 Gm6334-201ENSMUST00000207083 228 ntBASIC13.32□□□□□ -0.28
Rfx2P48379 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rfx2P48379 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.32□□□□□ -0.28
Rfx2P48379 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx2P48379 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx2P48379 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Rfx2P48379 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx2P48379 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx2P48379 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx2P48379 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.32□□□□□ -0.28
Rfx2P48379 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rfx2P48379 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx2P48379 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx2P48379 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx2P48379 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx2P48379 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Rfx2P48379 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx2P48379 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx2P48379 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx2P48379 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.32□□□□□ -0.28
Rfx2P48379 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.31□□□□□ -0.28
Rfx2P48379 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx2P48379 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx2P48379 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx2P48379 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx2P48379 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
Rfx2P48379 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx2P48379 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx2P48379 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx2P48379 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Rfx2P48379 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx2P48379 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Rfx2P48379 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.31□□□□□ -0.28
Rfx2P48379 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx2P48379 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx2P48379 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx2P48379 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.31□□□□□ -0.28
Rfx2P48379 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.31□□□□□ -0.28
Rfx2P48379 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx2P48379 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.31□□□□□ -0.28
Rfx2P48379 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.31□□□□□ -0.28
Rfx2P48379 Mir7221-201ENSMUST00000184009 72 ntBASIC13.31□□□□□ -0.28
Rfx2P48379 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Rfx2P48379 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx2P48379 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.31□□□□□ -0.28
Rfx2P48379 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Rfx2P48379 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx2P48379 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Rfx2P48379 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms