Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Gli1P47806 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gli1P47806 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gli1P47806 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gli1P47806 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gli1P47806 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gli1P47806 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gli1P47806 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Gli1P47806 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.43□□□□□ -0.42
Gli1P47806 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gli1P47806 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gli1P47806 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Gli1P47806 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.43□□□□□ -0.42
Gli1P47806 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gli1P47806 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.43□□□□□ -0.42
Gli1P47806 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gli1P47806 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Gli1P47806 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gli1P47806 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gli1P47806 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Gli1P47806 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gli1P47806 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gli1P47806 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Gli1P47806 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.42□□□□□ -0.42
Gli1P47806 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Gli1P47806 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gli1P47806 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gli1P47806 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gli1P47806 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.42□□□□□ -0.42
Gli1P47806 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gli1P47806 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.42□□□□□ -0.42
Gli1P47806 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gli1P47806 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gli1P47806 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Gli1P47806 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gli1P47806 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gli1P47806 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gli1P47806 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Gli1P47806 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gli1P47806 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Gli1P47806 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gli1P47806 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Gli1P47806 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gli1P47806 Gm29608-201ENSMUST00000190444 463 ntBASIC12.42□□□□□ -0.42
Gli1P47806 Gm40466-201ENSMUST00000212174 422 ntBASIC12.42□□□□□ -0.42
Gli1P47806 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.42□□□□□ -0.42
Gli1P47806 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.42□□□□□ -0.42
Gli1P47806 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gli1P47806 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.42□□□□□ -0.42
Gli1P47806 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gli1P47806 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gli1P47806 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gli1P47806 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gli1P47806 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gli1P47806 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Gli1P47806 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Gli1P47806 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gli1P47806 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Gli1P47806 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gli1P47806 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gli1P47806 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gli1P47806 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gli1P47806 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.42□□□□□ -0.42
Gli1P47806 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gli1P47806 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gli1P47806 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gli1P47806 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gli1P47806 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gli1P47806 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gli1P47806 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
Gli1P47806 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gli1P47806 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Gli1P47806 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gli1P47806 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gli1P47806 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.41□□□□□ -0.42
Gli1P47806 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.41□□□□□ -0.42
Gli1P47806 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gli1P47806 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.41□□□□□ -0.42
Gli1P47806 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gli1P47806 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.41□□□□□ -0.42
Gli1P47806 Gm5370-201ENSMUST00000187187 574 ntBASIC12.41□□□□□ -0.42
Gli1P47806 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.41□□□□□ -0.42
Gli1P47806 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.41□□□□□ -0.42
Gli1P47806 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gli1P47806 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Gli1P47806 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gli1P47806 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Gli1P47806 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gli1P47806 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gli1P47806 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gli1P47806 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gli1P47806 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.41□□□□□ -0.42
Gli1P47806 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gli1P47806 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gli1P47806 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gli1P47806 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gli1P47806 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.4□□□□□ -0.42
Gli1P47806 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gli1P47806 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gli1P47806 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms