Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.25□□□□□ -0.45
Tnfsf4P43488 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Gm8805-201ENSMUST00000117848 313 ntBASIC12.25□□□□□ -0.45
Tnfsf4P43488 Gm14921-201ENSMUST00000118643 908 ntBASIC12.25□□□□□ -0.45
Tnfsf4P43488 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Mir6977-201ENSMUST00000184960 64 ntBASIC12.25□□□□□ -0.45
Tnfsf4P43488 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.25□□□□□ -0.45
Tnfsf4P43488 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.25□□□□□ -0.45
Tnfsf4P43488 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Gm38671-201ENSMUST00000200573 130 ntBASIC12.25□□□□□ -0.45
Tnfsf4P43488 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.25□□□□□ -0.45
Tnfsf4P43488 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.25□□□□□ -0.45
Tnfsf4P43488 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfsf4P43488 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.24□□□□□ -0.45
Tnfsf4P43488 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Gm13612-201ENSMUST00000119276 390 ntBASIC12.24□□□□□ -0.45
Tnfsf4P43488 Gm14704-201ENSMUST00000120300 874 ntBASIC12.24□□□□□ -0.45
Tnfsf4P43488 Gm13123-201ENSMUST00000122173 492 ntBASIC12.24□□□□□ -0.45
Tnfsf4P43488 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tnfsf4P43488 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf4P43488 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Tnfsf4P43488 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf4P43488 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf4P43488 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf4P43488 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf4P43488 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.23□□□□□ -0.45
Tnfsf4P43488 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf4P43488 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.23□□□□□ -0.45
Tnfsf4P43488 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf4P43488 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf4P43488 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf4P43488 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf4P43488 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf4P43488 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf4P43488 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Tnfsf4P43488 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf4P43488 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf4P43488 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms