Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col18a1P39061 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col18a1P39061 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col18a1P39061 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col18a1P39061 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Col18a1P39061 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col18a1P39061 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col18a1P39061 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col18a1P39061 Gm5700-201ENSMUST00000191483 989 ntBASIC16.38■□□□□ 0.21
Col18a1P39061 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC16.38■□□□□ 0.21
Col18a1P39061 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC16.38■□□□□ 0.21
Col18a1P39061 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC16.38■□□□□ 0.21
Col18a1P39061 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col18a1P39061 Gm23105-201ENSMUST00000083719 134 ntBASIC16.38■□□□□ 0.21
Col18a1P39061 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col18a1P39061 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Col18a1P39061 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col18a1P39061 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col18a1P39061 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col18a1P39061 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col18a1P39061 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col18a1P39061 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col18a1P39061 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col18a1P39061 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Col18a1P39061 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Col18a1P39061 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC16.38■□□□□ 0.21
Col18a1P39061 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col18a1P39061 Gm12179-201ENSMUST00000118344 1272 ntBASIC16.38■□□□□ 0.21
Col18a1P39061 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col18a1P39061 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col18a1P39061 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC16.38■□□□□ 0.21
Col18a1P39061 Olfr692-202ENSMUST00000217827 1126 ntBASIC16.38■□□□□ 0.21
Col18a1P39061 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Col18a1P39061 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Col18a1P39061 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col18a1P39061 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col18a1P39061 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.38■□□□□ 0.21
Col18a1P39061 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Col18a1P39061 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col18a1P39061 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col18a1P39061 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col18a1P39061 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC16.37■□□□□ 0.21
Col18a1P39061 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Col18a1P39061 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col18a1P39061 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col18a1P39061 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col18a1P39061 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col18a1P39061 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col18a1P39061 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col18a1P39061 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Col18a1P39061 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col18a1P39061 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col18a1P39061 Gm22594-201ENSMUST00000104251 130 ntBASIC16.37■□□□□ 0.21
Col18a1P39061 Gm23912-201ENSMUST00000104687 87 ntBASIC16.37■□□□□ 0.21
Col18a1P39061 Gm9166-201ENSMUST00000120293 561 ntBASIC16.37■□□□□ 0.21
Col18a1P39061 Gm11244-201ENSMUST00000121243 237 ntBASIC16.37■□□□□ 0.21
Col18a1P39061 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC16.37■□□□□ 0.21
Col18a1P39061 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Col18a1P39061 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Col18a1P39061 Gm8436-201ENSMUST00000210152 1080 ntBASIC16.37■□□□□ 0.21
Col18a1P39061 Gm5749-201ENSMUST00000210673 1090 ntBASIC16.37■□□□□ 0.21
Col18a1P39061 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Col18a1P39061 AC164618.2-201ENSMUST00000224770 573 ntBASIC16.37■□□□□ 0.21
Col18a1P39061 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col18a1P39061 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Col18a1P39061 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col18a1P39061 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Col18a1P39061 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col18a1P39061 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Col18a1P39061 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col18a1P39061 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col18a1P39061 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col18a1P39061 Gm21358-201ENSMUST00000191645 1659 ntBASIC16.36■□□□□ 0.21
Col18a1P39061 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col18a1P39061 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col18a1P39061 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col18a1P39061 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col18a1P39061 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col18a1P39061 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
Col18a1P39061 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col18a1P39061 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col18a1P39061 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col18a1P39061 Gng5-ps-201ENSMUST00000120931 205 ntBASIC16.36■□□□□ 0.21
Col18a1P39061 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Col18a1P39061 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC16.36■□□□□ 0.21
Col18a1P39061 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Col18a1P39061 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Col18a1P39061 Gm17214-201ENSMUST00000164501 541 ntBASIC16.36■□□□□ 0.21
Col18a1P39061 Gm8451-201ENSMUST00000170338 447 ntBASIC16.36■□□□□ 0.21
Col18a1P39061 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col18a1P39061 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col18a1P39061 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Col18a1P39061 Gm45758-201ENSMUST00000212448 1006 ntBASIC16.36■□□□□ 0.21
Col18a1P39061 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col18a1P39061 Gm7536-201ENSMUST00000077389 444 ntBASIC16.36■□□□□ 0.21
Col18a1P39061 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col18a1P39061 Gm5453-201ENSMUST00000080866 447 ntBASIC16.36■□□□□ 0.21
Col18a1P39061 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC16.36■□□□□ 0.21
Col18a1P39061 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC16.36■□□□□ 0.21
Col18a1P39061 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms