Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh4P39038 Gm6222-202ENSMUST00000182143 629 ntBASIC12.19□□□□□ -0.46
Cdh4P39038 Gm45880-201ENSMUST00000213041 853 ntBASIC12.19□□□□□ -0.46
Cdh4P39038 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh4P39038 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh4P39038 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh4P39038 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cdh4P39038 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh4P39038 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh4P39038 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh4P39038 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh4P39038 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh4P39038 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh4P39038 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cdh4P39038 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh4P39038 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cdh4P39038 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh4P39038 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh4P39038 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh4P39038 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh4P39038 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh4P39038 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Cdh4P39038 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh4P39038 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh4P39038 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh4P39038 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh4P39038 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.19□□□□□ -0.46
Cdh4P39038 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh4P39038 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cdh4P39038 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh4P39038 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh4P39038 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh4P39038 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh4P39038 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh4P39038 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh4P39038 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh4P39038 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh4P39038 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.18□□□□□ -0.46
Cdh4P39038 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cdh4P39038 Gm22018-201ENSMUST00000104357 131 ntBASIC12.18□□□□□ -0.46
Cdh4P39038 Gm13392-201ENSMUST00000117708 150 ntBASIC12.18□□□□□ -0.46
Cdh4P39038 Gm13813-201ENSMUST00000120998 787 ntBASIC12.18□□□□□ -0.46
Cdh4P39038 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh4P39038 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh4P39038 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh4P39038 Gm7809-201ENSMUST00000153199 742 ntBASIC12.18□□□□□ -0.46
Cdh4P39038 Gm27572-201ENSMUST00000183702 255 ntBASIC12.18□□□□□ -0.46
Cdh4P39038 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.18□□□□□ -0.46
Cdh4P39038 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.18□□□□□ -0.46
Cdh4P39038 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh4P39038 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh4P39038 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cdh4P39038 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cdh4P39038 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh4P39038 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh4P39038 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh4P39038 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh4P39038 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.18□□□□□ -0.46
Cdh4P39038 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cdh4P39038 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh4P39038 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh4P39038 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cdh4P39038 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh4P39038 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh4P39038 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh4P39038 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh4P39038 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Cdh4P39038 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh4P39038 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh4P39038 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh4P39038 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh4P39038 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh4P39038 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh4P39038 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh4P39038 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh4P39038 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh4P39038 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.17□□□□□ -0.46
Cdh4P39038 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh4P39038 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.17□□□□□ -0.46
Cdh4P39038 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.17□□□□□ -0.46
Cdh4P39038 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Cdh4P39038 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.17□□□□□ -0.46
Cdh4P39038 Gm3890-201ENSMUST00000182416 207 ntBASIC12.17□□□□□ -0.46
Cdh4P39038 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.17□□□□□ -0.46
Cdh4P39038 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.17□□□□□ -0.46
Cdh4P39038 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Cdh4P39038 Gm43630-201ENSMUST00000201550 776 ntBASIC12.17□□□□□ -0.46
Cdh4P39038 Gm5781-201ENSMUST00000219792 443 ntBASIC12.17□□□□□ -0.46
Cdh4P39038 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.17□□□□□ -0.46
Cdh4P39038 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.17□□□□□ -0.46
Cdh4P39038 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh4P39038 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Cdh4P39038 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh4P39038 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cdh4P39038 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh4P39038 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Cdh4P39038 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.17□□□□□ -0.46
Cdh4P39038 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh4P39038 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Cdh4P39038 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms