Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a13P31649 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a13P31649 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a13P31649 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a13P31649 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc6a13P31649 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a13P31649 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a13P31649 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.87□□□□□ -0.35
Slc6a13P31649 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a13P31649 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a13P31649 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a13P31649 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a13P31649 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
Slc6a13P31649 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a13P31649 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a13P31649 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a13P31649 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.87□□□□□ -0.35
Slc6a13P31649 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Slc6a13P31649 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Slc6a13P31649 Gm18054-201ENSMUST00000207539 555 ntBASIC12.87□□□□□ -0.35
Slc6a13P31649 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.87□□□□□ -0.35
Slc6a13P31649 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a13P31649 Gm19309-201ENSMUST00000218295 205 ntBASIC12.87□□□□□ -0.35
Slc6a13P31649 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.87□□□□□ -0.35
Slc6a13P31649 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.87□□□□□ -0.35
Slc6a13P31649 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.87□□□□□ -0.35
Slc6a13P31649 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a13P31649 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.87□□□□□ -0.35
Slc6a13P31649 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a13P31649 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a13P31649 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a13P31649 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a13P31649 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a13P31649 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a13P31649 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a13P31649 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Slc6a13P31649 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a13P31649 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a13P31649 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Slc6a13P31649 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.86□□□□□ -0.35
Slc6a13P31649 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Slc6a13P31649 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a13P31649 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a13P31649 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a13P31649 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.86□□□□□ -0.35
Slc6a13P31649 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a13P31649 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a13P31649 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a13P31649 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.86□□□□□ -0.35
Slc6a13P31649 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a13P31649 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a13P31649 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a13P31649 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.86□□□□□ -0.35
Slc6a13P31649 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Slc6a13P31649 Gm13492-201ENSMUST00000119772 665 ntBASIC12.86□□□□□ -0.35
Slc6a13P31649 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.86□□□□□ -0.35
Slc6a13P31649 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.86□□□□□ -0.35
Slc6a13P31649 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a13P31649 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a13P31649 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.86□□□□□ -0.35
Slc6a13P31649 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.86□□□□□ -0.35
Slc6a13P31649 Gm43133-201ENSMUST00000197472 463 ntBASIC12.86□□□□□ -0.35
Slc6a13P31649 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.86□□□□□ -0.35
Slc6a13P31649 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.86□□□□□ -0.35
Slc6a13P31649 Gm5781-201ENSMUST00000219792 443 ntBASIC12.86□□□□□ -0.35
Slc6a13P31649 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.86□□□□□ -0.35
Slc6a13P31649 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.86□□□□□ -0.35
Slc6a13P31649 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a13P31649 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a13P31649 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Slc6a13P31649 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Slc6a13P31649 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a13P31649 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a13P31649 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a13P31649 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a13P31649 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a13P31649 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a13P31649 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Slc6a13P31649 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a13P31649 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a13P31649 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a13P31649 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Slc6a13P31649 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Slc6a13P31649 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.86□□□□□ -0.35
Slc6a13P31649 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a13P31649 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.86□□□□□ -0.35
Slc6a13P31649 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a13P31649 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.86□□□□□ -0.35
Slc6a13P31649 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a13P31649 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a13P31649 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Slc6a13P31649 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a13P31649 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a13P31649 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a13P31649 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Slc6a13P31649 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a13P31649 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Slc6a13P31649 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a13P31649 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a13P31649 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms