Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp3P28862 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Mmp3P28862 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Mmp3P28862 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp3P28862 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp3P28862 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.58□□□□□ -0.24
Mmp3P28862 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp3P28862 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp3P28862 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp3P28862 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp3P28862 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp3P28862 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp3P28862 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp3P28862 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Mmp3P28862 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Mmp3P28862 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp3P28862 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Mmp3P28862 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp3P28862 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp3P28862 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp3P28862 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
Mmp3P28862 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.57□□□□□ -0.24
Mmp3P28862 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.57□□□□□ -0.24
Mmp3P28862 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp3P28862 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Mmp3P28862 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp3P28862 Gm14028-201ENSMUST00000117434 479 ntBASIC13.57□□□□□ -0.24
Mmp3P28862 Gm14277-201ENSMUST00000121195 360 ntBASIC13.57□□□□□ -0.24
Mmp3P28862 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.57□□□□□ -0.24
Mmp3P28862 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.57□□□□□ -0.24
Mmp3P28862 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp3P28862 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp3P28862 Mir5132-201ENSMUST00000175166 71 ntBASIC13.57□□□□□ -0.24
Mmp3P28862 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.57□□□□□ -0.24
Mmp3P28862 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.57□□□□□ -0.24
Mmp3P28862 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Mmp3P28862 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.57□□□□□ -0.24
Mmp3P28862 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp3P28862 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp3P28862 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp3P28862 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp3P28862 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp3P28862 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Mmp3P28862 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp3P28862 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Mmp3P28862 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp3P28862 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp3P28862 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp3P28862 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp3P28862 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.56□□□□□ -0.24
Mmp3P28862 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp3P28862 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp3P28862 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp3P28862 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp3P28862 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp3P28862 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.56□□□□□ -0.24
Mmp3P28862 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp3P28862 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp3P28862 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
Mmp3P28862 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp3P28862 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.56□□□□□ -0.24
Mmp3P28862 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp3P28862 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.56□□□□□ -0.24
Mmp3P28862 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Mmp3P28862 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp3P28862 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp3P28862 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.56□□□□□ -0.24
Mmp3P28862 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp3P28862 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Mmp3P28862 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.56□□□□□ -0.24
Mmp3P28862 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp3P28862 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp3P28862 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Mmp3P28862 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp3P28862 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp3P28862 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp3P28862 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp3P28862 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Mmp3P28862 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Mmp3P28862 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp3P28862 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Mmp3P28862 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.56□□□□□ -0.24
Mmp3P28862 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp3P28862 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp3P28862 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Mmp3P28862 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Mmp3P28862 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp3P28862 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp3P28862 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp3P28862 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Mmp3P28862 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp3P28862 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp3P28862 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Mmp3P28862 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.55□□□□□ -0.24
Mmp3P28862 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp3P28862 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.55□□□□□ -0.24
Mmp3P28862 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp3P28862 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.55□□□□□ -0.24
Mmp3P28862 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp3P28862 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms