Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RxrbP28704 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.76□□□□□ -0.37
RxrbP28704 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
RxrbP28704 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RxrbP28704 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RxrbP28704 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
RxrbP28704 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RxrbP28704 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.76□□□□□ -0.37
RxrbP28704 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RxrbP28704 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RxrbP28704 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.76□□□□□ -0.37
RxrbP28704 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RxrbP28704 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.76□□□□□ -0.37
RxrbP28704 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RxrbP28704 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RxrbP28704 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RxrbP28704 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RxrbP28704 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.76□□□□□ -0.37
RxrbP28704 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.76□□□□□ -0.37
RxrbP28704 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.76□□□□□ -0.37
RxrbP28704 Gm5867-201ENSMUST00000063197 592 ntBASIC12.76□□□□□ -0.37
RxrbP28704 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RxrbP28704 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RxrbP28704 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RxrbP28704 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RxrbP28704 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RxrbP28704 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RxrbP28704 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
RxrbP28704 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RxrbP28704 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RxrbP28704 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.76□□□□□ -0.37
RxrbP28704 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RxrbP28704 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
RxrbP28704 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RxrbP28704 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RxrbP28704 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RxrbP28704 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RxrbP28704 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RxrbP28704 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
RxrbP28704 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RxrbP28704 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RxrbP28704 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RxrbP28704 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RxrbP28704 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RxrbP28704 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
RxrbP28704 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RxrbP28704 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
RxrbP28704 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RxrbP28704 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RxrbP28704 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RxrbP28704 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RxrbP28704 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RxrbP28704 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RxrbP28704 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.75□□□□□ -0.37
RxrbP28704 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RxrbP28704 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RxrbP28704 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RxrbP28704 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.75□□□□□ -0.37
RxrbP28704 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
RxrbP28704 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RxrbP28704 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RxrbP28704 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.75□□□□□ -0.37
RxrbP28704 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.75□□□□□ -0.37
RxrbP28704 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.75□□□□□ -0.37
RxrbP28704 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RxrbP28704 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RxrbP28704 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RxrbP28704 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RxrbP28704 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RxrbP28704 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RxrbP28704 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
RxrbP28704 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RxrbP28704 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RxrbP28704 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RxrbP28704 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RxrbP28704 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RxrbP28704 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RxrbP28704 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RxrbP28704 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RxrbP28704 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RxrbP28704 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RxrbP28704 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.74□□□□□ -0.37
RxrbP28704 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RxrbP28704 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RxrbP28704 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RxrbP28704 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
RxrbP28704 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.74□□□□□ -0.37
RxrbP28704 Gm20949-201ENSMUST00000206478 952 ntBASIC12.74□□□□□ -0.37
RxrbP28704 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.74□□□□□ -0.37
RxrbP28704 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RxrbP28704 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RxrbP28704 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RxrbP28704 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RxrbP28704 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RxrbP28704 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RxrbP28704 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
RxrbP28704 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RxrbP28704 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RxrbP28704 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
RxrbP28704 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms