Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Hoxc6P10629 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc6P10629 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc6P10629 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc6P10629 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Hoxc6P10629 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc6P10629 Gm15711-201ENSMUST00000118889 535 ntBASIC14.06□□□□□ -0.16
Hoxc6P10629 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC14.06□□□□□ -0.16
Hoxc6P10629 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.06□□□□□ -0.16
Hoxc6P10629 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC14.06□□□□□ -0.16
Hoxc6P10629 D9Wsu149-201ENSMUST00000214169 594 ntBASIC14.06□□□□□ -0.16
Hoxc6P10629 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc6P10629 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc6P10629 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc6P10629 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc6P10629 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc6P10629 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc6P10629 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc6P10629 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.06□□□□□ -0.16
Hoxc6P10629 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Hoxc6P10629 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc6P10629 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.06□□□□□ -0.16
Hoxc6P10629 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc6P10629 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.06□□□□□ -0.16
Hoxc6P10629 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc6P10629 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc6P10629 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc6P10629 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc6P10629 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc6P10629 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc6P10629 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc6P10629 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc6P10629 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc6P10629 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc6P10629 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.05□□□□□ -0.16
Hoxc6P10629 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc6P10629 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc6P10629 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc6P10629 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.05□□□□□ -0.16
Hoxc6P10629 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc6P10629 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc6P10629 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc6P10629 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc6P10629 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc6P10629 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
Hoxc6P10629 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.05□□□□□ -0.16
Hoxc6P10629 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc6P10629 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.05□□□□□ -0.16
Hoxc6P10629 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.05□□□□□ -0.16
Hoxc6P10629 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc6P10629 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Hoxc6P10629 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Hoxc6P10629 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Hoxc6P10629 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc6P10629 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc6P10629 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc6P10629 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc6P10629 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Hoxc6P10629 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.05□□□□□ -0.16
Hoxc6P10629 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc6P10629 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc6P10629 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc6P10629 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.05□□□□□ -0.16
Hoxc6P10629 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc6P10629 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc6P10629 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc6P10629 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc6P10629 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Hoxc6P10629 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc6P10629 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc6P10629 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc6P10629 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc6P10629 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc6P10629 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc6P10629 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc6P10629 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Hoxc6P10629 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc6P10629 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.04□□□□□ -0.16
Hoxc6P10629 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc6P10629 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc6P10629 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc6P10629 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Hoxc6P10629 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc6P10629 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.04□□□□□ -0.16
Hoxc6P10629 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc6P10629 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.04□□□□□ -0.16
Hoxc6P10629 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Hoxc6P10629 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC14.04□□□□□ -0.16
Hoxc6P10629 Gm28071-201ENSMUST00000190355 478 ntBASIC14.04□□□□□ -0.16
Hoxc6P10629 Gm42937-201ENSMUST00000197360 752 ntBASIC14.04□□□□□ -0.16
Hoxc6P10629 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc6P10629 AC159819.2-201ENSMUST00000216151 342 ntBASIC14.04□□□□□ -0.16
Hoxc6P10629 AC154276.3-201ENSMUST00000227643 998 ntBASIC14.04□□□□□ -0.16
Hoxc6P10629 Ntng1-201ENSMUST00000051253 327 ntBASIC14.04□□□□□ -0.16
Hoxc6P10629 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc6P10629 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Hoxc6P10629 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc6P10629 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.04□□□□□ -0.16
Hoxc6P10629 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc6P10629 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms