Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nid1P10493 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Nid1P10493 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nid1P10493 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nid1P10493 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nid1P10493 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nid1P10493 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nid1P10493 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nid1P10493 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.9□□□□□ -0.5
Nid1P10493 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nid1P10493 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Nid1P10493 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nid1P10493 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Nid1P10493 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nid1P10493 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nid1P10493 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.9□□□□□ -0.5
Nid1P10493 Gm12384-201ENSMUST00000119228 919 ntBASIC11.9□□□□□ -0.5
Nid1P10493 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.9□□□□□ -0.5
Nid1P10493 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.9□□□□□ -0.5
Nid1P10493 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.9□□□□□ -0.5
Nid1P10493 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.9□□□□□ -0.5
Nid1P10493 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.9□□□□□ -0.5
Nid1P10493 Gm27847-201ENSMUST00000183711 107 ntBASIC11.9□□□□□ -0.5
Nid1P10493 Gm27375-201ENSMUST00000183799 107 ntBASIC11.9□□□□□ -0.5
Nid1P10493 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.9□□□□□ -0.5
Nid1P10493 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Nid1P10493 Gm5035-201ENSMUST00000215581 927 ntBASIC11.9□□□□□ -0.5
Nid1P10493 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nid1P10493 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nid1P10493 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nid1P10493 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nid1P10493 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.9□□□□□ -0.5
Nid1P10493 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nid1P10493 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nid1P10493 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nid1P10493 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.9□□□□□ -0.5
Nid1P10493 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Nid1P10493 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.9□□□□□ -0.5
Nid1P10493 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nid1P10493 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nid1P10493 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Nid1P10493 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Nid1P10493 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
Nid1P10493 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nid1P10493 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nid1P10493 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.89□□□□□ -0.51
Nid1P10493 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nid1P10493 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.89□□□□□ -0.51
Nid1P10493 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nid1P10493 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nid1P10493 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.89□□□□□ -0.51
Nid1P10493 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Nid1P10493 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.89□□□□□ -0.51
Nid1P10493 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nid1P10493 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nid1P10493 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.89□□□□□ -0.51
Nid1P10493 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.89□□□□□ -0.51
Nid1P10493 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nid1P10493 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.89□□□□□ -0.51
Nid1P10493 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nid1P10493 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nid1P10493 Gm26927-201ENSMUST00000182385 965 ntBASIC11.89□□□□□ -0.51
Nid1P10493 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.89□□□□□ -0.51
Nid1P10493 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nid1P10493 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nid1P10493 Gm24526-201ENSMUST00000082921 158 ntBASIC11.89□□□□□ -0.51
Nid1P10493 Gm6091-201ENSMUST00000098307 165 ntBASIC11.89□□□□□ -0.51
Nid1P10493 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.89□□□□□ -0.51
Nid1P10493 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nid1P10493 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nid1P10493 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Nid1P10493 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nid1P10493 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nid1P10493 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Nid1P10493 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nid1P10493 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nid1P10493 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.89□□□□□ -0.51
Nid1P10493 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Nid1P10493 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nid1P10493 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nid1P10493 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.88□□□□□ -0.51
Nid1P10493 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nid1P10493 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Nid1P10493 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nid1P10493 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nid1P10493 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nid1P10493 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Nid1P10493 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nid1P10493 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nid1P10493 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nid1P10493 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nid1P10493 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nid1P10493 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nid1P10493 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Nid1P10493 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nid1P10493 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.88□□□□□ -0.51
Nid1P10493 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.88□□□□□ -0.51
Nid1P10493 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nid1P10493 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.88□□□□□ -0.51
Nid1P10493 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms