Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Hoxc8P09025 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxc8P09025 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxc8P09025 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxc8P09025 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxc8P09025 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxc8P09025 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Hoxc8P09025 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxc8P09025 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.44□□□□□ -0.26
Hoxc8P09025 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.44□□□□□ -0.26
Hoxc8P09025 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.44□□□□□ -0.26
Hoxc8P09025 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxc8P09025 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxc8P09025 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxc8P09025 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxc8P09025 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxc8P09025 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxc8P09025 Gm14058-201ENSMUST00000116082 735 ntBASIC13.44□□□□□ -0.26
Hoxc8P09025 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxc8P09025 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Hoxc8P09025 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13.44□□□□□ -0.26
Hoxc8P09025 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.44□□□□□ -0.26
Hoxc8P09025 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.44□□□□□ -0.26
Hoxc8P09025 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.44□□□□□ -0.26
Hoxc8P09025 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxc8P09025 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxc8P09025 Ntng1-201ENSMUST00000051253 327 ntBASIC13.44□□□□□ -0.26
Hoxc8P09025 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.44□□□□□ -0.26
Hoxc8P09025 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.44□□□□□ -0.26
Hoxc8P09025 Gm21811-201ENSMUST00000096485 930 ntBASIC13.44□□□□□ -0.26
Hoxc8P09025 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.44□□□□□ -0.26
Hoxc8P09025 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.44□□□□□ -0.26
Hoxc8P09025 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxc8P09025 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxc8P09025 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxc8P09025 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxc8P09025 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxc8P09025 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxc8P09025 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxc8P09025 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxc8P09025 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Hoxc8P09025 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxc8P09025 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxc8P09025 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.43□□□□□ -0.26
Hoxc8P09025 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxc8P09025 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxc8P09025 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxc8P09025 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxc8P09025 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxc8P09025 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxc8P09025 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxc8P09025 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxc8P09025 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.43□□□□□ -0.26
Hoxc8P09025 Gm23251-201ENSMUST00000103773 110 ntBASIC13.43□□□□□ -0.26
Hoxc8P09025 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.43□□□□□ -0.26
Hoxc8P09025 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxc8P09025 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxc8P09025 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC13.43□□□□□ -0.26
Hoxc8P09025 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxc8P09025 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
Hoxc8P09025 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.43□□□□□ -0.26
Hoxc8P09025 Gm4482-201ENSMUST00000200876 742 ntBASIC13.43□□□□□ -0.26
Hoxc8P09025 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxc8P09025 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.43□□□□□ -0.26
Hoxc8P09025 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.43□□□□□ -0.26
Hoxc8P09025 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxc8P09025 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxc8P09025 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxc8P09025 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxc8P09025 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.43□□□□□ -0.26
Hoxc8P09025 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.43□□□□□ -0.26
Hoxc8P09025 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxc8P09025 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxc8P09025 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxc8P09025 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxc8P09025 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.43□□□□□ -0.26
Hoxc8P09025 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.43□□□□□ -0.26
Hoxc8P09025 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Hoxc8P09025 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxc8P09025 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc8P09025 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc8P09025 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.42□□□□□ -0.26
Hoxc8P09025 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.42□□□□□ -0.26
Hoxc8P09025 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc8P09025 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc8P09025 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Hoxc8P09025 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.42□□□□□ -0.26
Hoxc8P09025 Gm7851-201ENSMUST00000117574 323 ntBASIC13.42□□□□□ -0.26
Hoxc8P09025 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.42□□□□□ -0.26
Hoxc8P09025 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.42□□□□□ -0.26
Hoxc8P09025 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.42□□□□□ -0.26
Hoxc8P09025 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc8P09025 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Hoxc8P09025 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.42□□□□□ -0.26
Hoxc8P09025 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc8P09025 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.42□□□□□ -0.26
Hoxc8P09025 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.42□□□□□ -0.26
Hoxc8P09025 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc8P09025 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Hoxc8P09025 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms