Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PdgfrbP05622 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.87□□□□□ -0.35
PdgfrbP05622 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.87□□□□□ -0.35
PdgfrbP05622 Gm18187-201ENSMUST00000196476 984 ntBASIC12.87□□□□□ -0.35
PdgfrbP05622 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.87□□□□□ -0.35
PdgfrbP05622 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
PdgfrbP05622 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.87□□□□□ -0.35
PdgfrbP05622 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
PdgfrbP05622 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PdgfrbP05622 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PdgfrbP05622 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PdgfrbP05622 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PdgfrbP05622 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
PdgfrbP05622 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PdgfrbP05622 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.87□□□□□ -0.35
PdgfrbP05622 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PdgfrbP05622 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PdgfrbP05622 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.87□□□□□ -0.35
PdgfrbP05622 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.86□□□□□ -0.35
PdgfrbP05622 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
PdgfrbP05622 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PdgfrbP05622 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PdgfrbP05622 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PdgfrbP05622 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PdgfrbP05622 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PdgfrbP05622 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PdgfrbP05622 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PdgfrbP05622 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
PdgfrbP05622 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.86□□□□□ -0.35
PdgfrbP05622 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.86□□□□□ -0.35
PdgfrbP05622 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PdgfrbP05622 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PdgfrbP05622 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.86□□□□□ -0.35
PdgfrbP05622 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.86□□□□□ -0.35
PdgfrbP05622 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.86□□□□□ -0.35
PdgfrbP05622 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PdgfrbP05622 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.86□□□□□ -0.35
PdgfrbP05622 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.86□□□□□ -0.35
PdgfrbP05622 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PdgfrbP05622 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
PdgfrbP05622 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
PdgfrbP05622 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PdgfrbP05622 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PdgfrbP05622 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PdgfrbP05622 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PdgfrbP05622 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.86□□□□□ -0.35
PdgfrbP05622 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.86□□□□□ -0.35
PdgfrbP05622 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PdgfrbP05622 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
PdgfrbP05622 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PdgfrbP05622 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PdgfrbP05622 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PdgfrbP05622 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PdgfrbP05622 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PdgfrbP05622 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PdgfrbP05622 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PdgfrbP05622 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
PdgfrbP05622 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PdgfrbP05622 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.86□□□□□ -0.35
PdgfrbP05622 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PdgfrbP05622 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.85□□□□□ -0.35
PdgfrbP05622 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PdgfrbP05622 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PdgfrbP05622 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
PdgfrbP05622 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.85□□□□□ -0.35
PdgfrbP05622 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
PdgfrbP05622 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
PdgfrbP05622 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
PdgfrbP05622 Gm14921-201ENSMUST00000118643 908 ntBASIC12.85□□□□□ -0.35
PdgfrbP05622 Gm15824-201ENSMUST00000119516 955 ntBASIC12.85□□□□□ -0.35
PdgfrbP05622 Gm13829-201ENSMUST00000119600 138 ntBASIC12.85□□□□□ -0.35
PdgfrbP05622 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PdgfrbP05622 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.85□□□□□ -0.35
PdgfrbP05622 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
PdgfrbP05622 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.85□□□□□ -0.35
PdgfrbP05622 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.85□□□□□ -0.35
PdgfrbP05622 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PdgfrbP05622 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.85□□□□□ -0.35
PdgfrbP05622 Gm27731-201ENSMUST00000185192 107 ntBASIC12.85□□□□□ -0.35
PdgfrbP05622 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.85□□□□□ -0.35
PdgfrbP05622 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PdgfrbP05622 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
PdgfrbP05622 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
PdgfrbP05622 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.85□□□□□ -0.35
PdgfrbP05622 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
PdgfrbP05622 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PdgfrbP05622 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.85□□□□□ -0.35
PdgfrbP05622 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
PdgfrbP05622 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PdgfrbP05622 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
PdgfrbP05622 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PdgfrbP05622 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
PdgfrbP05622 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PdgfrbP05622 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PdgfrbP05622 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.84□□□□□ -0.35
PdgfrbP05622 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
PdgfrbP05622 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdgfrbP05622 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms