Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Hoxa3P02831 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hoxa3P02831 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hoxa3P02831 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hoxa3P02831 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Hoxa3P02831 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hoxa3P02831 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hoxa3P02831 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hoxa3P02831 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Hoxa3P02831 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hoxa3P02831 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hoxa3P02831 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hoxa3P02831 Gm6023-201ENSMUST00000118217 606 ntBASIC10.67□□□□□ -0.7
Hoxa3P02831 Gm13350-201ENSMUST00000120519 479 ntBASIC10.67□□□□□ -0.7
Hoxa3P02831 Gm13342-201ENSMUST00000121055 207 ntBASIC10.67□□□□□ -0.7
Hoxa3P02831 Mir7221-201ENSMUST00000184009 72 ntBASIC10.67□□□□□ -0.7
Hoxa3P02831 Gm7895-201ENSMUST00000187459 1173 ntBASIC10.67□□□□□ -0.7
Hoxa3P02831 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.67□□□□□ -0.7
Hoxa3P02831 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hoxa3P02831 Gm3961-201ENSMUST00000204425 994 ntBASIC10.67□□□□□ -0.7
Hoxa3P02831 Gm7783-201ENSMUST00000204795 781 ntBASIC10.67□□□□□ -0.7
Hoxa3P02831 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.67□□□□□ -0.7
Hoxa3P02831 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.67□□□□□ -0.7
Hoxa3P02831 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hoxa3P02831 Rassf8-202ENSMUST00000058538 1131 ntBASIC10.67□□□□□ -0.7
Hoxa3P02831 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.67□□□□□ -0.7
Hoxa3P02831 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Hoxa3P02831 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hoxa3P02831 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hoxa3P02831 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hoxa3P02831 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hoxa3P02831 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hoxa3P02831 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hoxa3P02831 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hoxa3P02831 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hoxa3P02831 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hoxa3P02831 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.67□□□□□ -0.7
Hoxa3P02831 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hoxa3P02831 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Hoxa3P02831 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC10.67□□□□□ -0.7
Hoxa3P02831 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hoxa3P02831 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hoxa3P02831 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hoxa3P02831 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hoxa3P02831 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hoxa3P02831 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.66□□□□□ -0.7
Hoxa3P02831 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Hoxa3P02831 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Hoxa3P02831 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.66□□□□□ -0.7
Hoxa3P02831 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.66□□□□□ -0.7
Hoxa3P02831 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.66□□□□□ -0.7
Hoxa3P02831 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC10.66□□□□□ -0.7
Hoxa3P02831 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Hoxa3P02831 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.66□□□□□ -0.7
Hoxa3P02831 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC10.66□□□□□ -0.7
Hoxa3P02831 Gm18584-201ENSMUST00000203098 964 ntBASIC10.66□□□□□ -0.7
Hoxa3P02831 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.66□□□□□ -0.7
Hoxa3P02831 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.66□□□□□ -0.7
Hoxa3P02831 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC10.66□□□□□ -0.7
Hoxa3P02831 Gm9368-201ENSMUST00000219348 831 ntBASIC10.66□□□□□ -0.7
Hoxa3P02831 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Hoxa3P02831 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Hoxa3P02831 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Hoxa3P02831 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Hoxa3P02831 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Hoxa3P02831 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Hoxa3P02831 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Hoxa3P02831 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Hoxa3P02831 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC10.66□□□□□ -0.7
Hoxa3P02831 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hoxa3P02831 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms