Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.74□□□□□ -0.21
Vti1aO89116 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.74□□□□□ -0.21
Vti1aO89116 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1aO89116 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1aO89116 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1aO89116 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1aO89116 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.74□□□□□ -0.21
Vti1aO89116 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Vti1aO89116 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.73□□□□□ -0.21
Vti1aO89116 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Vti1aO89116 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1aO89116 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Vti1aO89116 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1aO89116 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.73□□□□□ -0.21
Vti1aO89116 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1aO89116 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1aO89116 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1aO89116 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Vti1aO89116 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.73□□□□□ -0.21
Vti1aO89116 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1aO89116 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1aO89116 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1aO89116 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1aO89116 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.73□□□□□ -0.21
Vti1aO89116 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.73□□□□□ -0.21
Vti1aO89116 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.73□□□□□ -0.21
Vti1aO89116 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.73□□□□□ -0.21
Vti1aO89116 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.73□□□□□ -0.21
Vti1aO89116 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC13.73□□□□□ -0.21
Vti1aO89116 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.73□□□□□ -0.21
Vti1aO89116 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Vti1aO89116 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Vti1aO89116 Gm5363-201ENSMUST00000211927 938 ntBASIC13.73□□□□□ -0.21
Vti1aO89116 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.73□□□□□ -0.21
Vti1aO89116 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Vti1aO89116 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1aO89116 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1aO89116 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1aO89116 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1aO89116 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1aO89116 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1aO89116 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1aO89116 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1aO89116 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1aO89116 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Vti1aO89116 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1aO89116 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1aO89116 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1aO89116 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1aO89116 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1aO89116 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1aO89116 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Vti1aO89116 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1aO89116 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1aO89116 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1aO89116 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1aO89116 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1aO89116 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1aO89116 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.72□□□□□ -0.21
Vti1aO89116 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1aO89116 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.72□□□□□ -0.21
Vti1aO89116 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1aO89116 Gm12997-201ENSMUST00000120207 640 ntBASIC13.72□□□□□ -0.21
Vti1aO89116 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1aO89116 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1aO89116 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Vti1aO89116 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1aO89116 Gm30285-201ENSMUST00000214614 422 ntBASIC13.72□□□□□ -0.21
Vti1aO89116 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Vti1aO89116 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1aO89116 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1aO89116 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1aO89116 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.72□□□□□ -0.21
Vti1aO89116 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1aO89116 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.72□□□□□ -0.21
Vti1aO89116 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1aO89116 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1aO89116 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1aO89116 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1aO89116 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1aO89116 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1aO89116 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1aO89116 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1aO89116 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1aO89116 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1aO89116 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1aO89116 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1aO89116 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1aO89116 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1aO89116 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1aO89116 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1aO89116 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1aO89116 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1aO89116 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1aO89116 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1aO89116 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1aO89116 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.71□□□□□ -0.21
Vti1aO89116 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.71□□□□□ -0.21
Vti1aO89116 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1aO89116 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms