Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.73□□□□□ -0.53
Cops4O88544 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 Gm21854-201ENSMUST00000179901 471 ntBASIC11.73□□□□□ -0.53
Cops4O88544 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cops4O88544 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.73□□□□□ -0.53
Cops4O88544 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.73□□□□□ -0.53
Cops4O88544 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cops4O88544 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.73□□□□□ -0.53
Cops4O88544 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cops4O88544 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 Gm5161-201ENSMUST00000075243 853 ntBASIC11.73□□□□□ -0.53
Cops4O88544 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cops4O88544 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.73□□□□□ -0.53
Cops4O88544 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.72□□□□□ -0.53
Cops4O88544 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.72□□□□□ -0.53
Cops4O88544 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cops4O88544 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cops4O88544 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cops4O88544 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.72□□□□□ -0.53
Cops4O88544 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Cops4O88544 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cops4O88544 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.72□□□□□ -0.53
Cops4O88544 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 Gm14719-201ENSMUST00000121891 340 ntBASIC11.72□□□□□ -0.53
Cops4O88544 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.72□□□□□ -0.53
Cops4O88544 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 Gm28760-201ENSMUST00000185995 736 ntBASIC11.72□□□□□ -0.53
Cops4O88544 Gm5279-201ENSMUST00000199575 745 ntBASIC11.72□□□□□ -0.53
Cops4O88544 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.72□□□□□ -0.53
Cops4O88544 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.72□□□□□ -0.53
Cops4O88544 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.72□□□□□ -0.53
Cops4O88544 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.72□□□□□ -0.53
Cops4O88544 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Cops4O88544 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.72□□□□□ -0.53
Cops4O88544 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.72□□□□□ -0.53
Cops4O88544 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cops4O88544 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Cops4O88544 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cops4O88544 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Cops4O88544 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cops4O88544 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cops4O88544 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cops4O88544 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Cops4O88544 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cops4O88544 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cops4O88544 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cops4O88544 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cops4O88544 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cops4O88544 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.71□□□□□ -0.53
Cops4O88544 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cops4O88544 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cops4O88544 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.71□□□□□ -0.53
Cops4O88544 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cops4O88544 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cops4O88544 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cops4O88544 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Cops4O88544 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cops4O88544 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms