Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pfdn2O70591 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Pfdn2O70591 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pfdn2O70591 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pfdn2O70591 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.69□□□□□ -0.7
Pfdn2O70591 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Pfdn2O70591 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pfdn2O70591 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pfdn2O70591 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pfdn2O70591 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Pfdn2O70591 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pfdn2O70591 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.69□□□□□ -0.7
Pfdn2O70591 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pfdn2O70591 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pfdn2O70591 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pfdn2O70591 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pfdn2O70591 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pfdn2O70591 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pfdn2O70591 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Pfdn2O70591 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Pfdn2O70591 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pfdn2O70591 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC10.69□□□□□ -0.7
Pfdn2O70591 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pfdn2O70591 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pfdn2O70591 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.69□□□□□ -0.7
Pfdn2O70591 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pfdn2O70591 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pfdn2O70591 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pfdn2O70591 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pfdn2O70591 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pfdn2O70591 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pfdn2O70591 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pfdn2O70591 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.68□□□□□ -0.7
Pfdn2O70591 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Pfdn2O70591 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pfdn2O70591 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pfdn2O70591 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Pfdn2O70591 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Pfdn2O70591 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.68□□□□□ -0.7
Pfdn2O70591 Gm38359-201ENSMUST00000191884 2225 ntBASIC10.68□□□□□ -0.7
Pfdn2O70591 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pfdn2O70591 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pfdn2O70591 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Pfdn2O70591 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pfdn2O70591 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Pfdn2O70591 Gm15770-201ENSMUST00000117498 584 ntBASIC10.68□□□□□ -0.7
Pfdn2O70591 Gm11557-201ENSMUST00000120200 1008 ntBASIC10.68□□□□□ -0.7
Pfdn2O70591 Gm11594-201ENSMUST00000122313 162 ntBASIC10.68□□□□□ -0.7
Pfdn2O70591 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pfdn2O70591 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC10.68□□□□□ -0.7
Pfdn2O70591 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pfdn2O70591 Gm6736-201ENSMUST00000166583 948 ntBASIC10.68□□□□□ -0.7
Pfdn2O70591 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Pfdn2O70591 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pfdn2O70591 Gm3436-201ENSMUST00000179930 840 ntBASIC10.68□□□□□ -0.7
Pfdn2O70591 Gm8927-201ENSMUST00000181978 981 ntBASIC10.68□□□□□ -0.7
Pfdn2O70591 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC10.68□□□□□ -0.7
Pfdn2O70591 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC10.68□□□□□ -0.7
Pfdn2O70591 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC10.68□□□□□ -0.7
Pfdn2O70591 Gm5779-201ENSMUST00000218467 910 ntBASIC10.68□□□□□ -0.7
Pfdn2O70591 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pfdn2O70591 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pfdn2O70591 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pfdn2O70591 Gm3222-201ENSMUST00000071282 990 ntBASIC10.68□□□□□ -0.7
Pfdn2O70591 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Pfdn2O70591 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pfdn2O70591 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.68□□□□□ -0.7
Pfdn2O70591 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pfdn2O70591 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pfdn2O70591 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.68□□□□□ -0.7
Pfdn2O70591 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pfdn2O70591 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pfdn2O70591 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pfdn2O70591 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pfdn2O70591 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.68□□□□□ -0.7
Pfdn2O70591 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pfdn2O70591 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Pfdn2O70591 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pfdn2O70591 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Pfdn2O70591 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pfdn2O70591 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pfdn2O70591 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pfdn2O70591 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.68□□□□□ -0.7
Pfdn2O70591 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.68□□□□□ -0.7
Pfdn2O70591 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pfdn2O70591 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pfdn2O70591 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.67□□□□□ -0.7
Pfdn2O70591 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Pfdn2O70591 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pfdn2O70591 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pfdn2O70591 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pfdn2O70591 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pfdn2O70591 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pfdn2O70591 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pfdn2O70591 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pfdn2O70591 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pfdn2O70591 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.67□□□□□ -0.7
Pfdn2O70591 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pfdn2O70591 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pfdn2O70591 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms