Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm15881-201ENSMUST00000148792 942 ntBASIC16.17■□□□□ 0.18
Ubr1O70481 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC16.17■□□□□ 0.18
Ubr1O70481 Gm2965-201ENSMUST00000198365 343 ntBASIC16.17■□□□□ 0.18
Ubr1O70481 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ubr1O70481 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ubr1O70481 AC154290.1-201ENSMUST00000223786 1240 ntBASIC16.17■□□□□ 0.18
Ubr1O70481 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubr1O70481 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubr1O70481 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
Ubr1O70481 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC16.17■□□□□ 0.18
Ubr1O70481 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ubr1O70481 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ubr1O70481 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Ubr1O70481 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Ubr1O70481 Gm15573-201ENSMUST00000119487 540 ntBASIC16.16■□□□□ 0.18
Ubr1O70481 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC16.16■□□□□ 0.18
Ubr1O70481 Gm27438-201ENSMUST00000183480 110 ntBASIC16.16■□□□□ 0.18
Ubr1O70481 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubr1O70481 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubr1O70481 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubr1O70481 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubr1O70481 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ubr1O70481 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ubr1O70481 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubr1O70481 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ubr1O70481 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ubr1O70481 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubr1O70481 Gm45266-201ENSMUST00000210111 2173 ntBASIC16.16■□□□□ 0.18
Ubr1O70481 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubr1O70481 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubr1O70481 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ubr1O70481 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ubr1O70481 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC16.15■□□□□ 0.18
Ubr1O70481 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ubr1O70481 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Ubr1O70481 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC16.15■□□□□ 0.18
Ubr1O70481 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ubr1O70481 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ubr1O70481 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
Ubr1O70481 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Ubr1O70481 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ubr1O70481 Gm28686-201ENSMUST00000187404 609 ntBASIC16.15■□□□□ 0.18
Ubr1O70481 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC16.15■□□□□ 0.18
Ubr1O70481 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ubr1O70481 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubr1O70481 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubr1O70481 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubr1O70481 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ubr1O70481 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ubr1O70481 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC16.15■□□□□ 0.18
Ubr1O70481 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ubr1O70481 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubr1O70481 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ubr1O70481 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubr1O70481 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubr1O70481 Gm12029-201ENSMUST00000120073 832 ntBASIC16.15■□□□□ 0.18
Ubr1O70481 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ubr1O70481 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC16.15■□□□□ 0.18
Ubr1O70481 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ubr1O70481 Gm19287-201ENSMUST00000203190 358 ntBASIC16.15■□□□□ 0.18
Ubr1O70481 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Ubr1O70481 AC122876.1-201ENSMUST00000217619 825 ntBASIC16.15■□□□□ 0.18
Ubr1O70481 Gm10752-201ENSMUST00000218348 729 ntBASIC16.15■□□□□ 0.18
Ubr1O70481 AC153505.1-201ENSMUST00000218819 1071 ntBASIC16.15■□□□□ 0.18
Ubr1O70481 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ubr1O70481 AC132901.1-201ENSMUST00000224345 508 ntBASIC16.15■□□□□ 0.18
Ubr1O70481 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ubr1O70481 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ubr1O70481 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubr1O70481 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ubr1O70481 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubr1O70481 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
Ubr1O70481 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Ubr1O70481 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Ubr1O70481 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Ubr1O70481 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Ubr1O70481 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
Ubr1O70481 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.14■□□□□ 0.18
Ubr1O70481 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ubr1O70481 AC154671.1-201ENSMUST00000228617 1578 ntBASIC16.14■□□□□ 0.17
Ubr1O70481 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ubr1O70481 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ubr1O70481 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC16.14■□□□□ 0.17
Ubr1O70481 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ubr1O70481 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Ubr1O70481 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC16.14■□□□□ 0.17
Ubr1O70481 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ubr1O70481 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC16.14■□□□□ 0.17
Ubr1O70481 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ubr1O70481 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ubr1O70481 Gm37691-201ENSMUST00000192147 2573 ntBASIC16.14■□□□□ 0.17
Ubr1O70481 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ubr1O70481 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ubr1O70481 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
Ubr1O70481 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Ubr1O70481 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ubr1O70481 Gm43677-201ENSMUST00000198098 2378 ntBASIC16.14■□□□□ 0.17
Ubr1O70481 AC126262.1-201ENSMUST00000221802 1904 ntBASIC16.14■□□□□ 0.17
Ubr1O70481 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ubr1O70481 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms