Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SgceO70258 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgceO70258 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgceO70258 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.41□□□□□ -0.58
SgceO70258 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
SgceO70258 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgceO70258 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgceO70258 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SgceO70258 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SgceO70258 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgceO70258 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgceO70258 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgceO70258 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
SgceO70258 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
SgceO70258 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgceO70258 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgceO70258 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgceO70258 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.4□□□□□ -0.58
SgceO70258 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgceO70258 Gm11478-201ENSMUST00000117851 599 ntBASIC11.4□□□□□ -0.58
SgceO70258 Gm13123-201ENSMUST00000122173 492 ntBASIC11.4□□□□□ -0.58
SgceO70258 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.4□□□□□ -0.58
SgceO70258 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.4□□□□□ -0.58
SgceO70258 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.4□□□□□ -0.58
SgceO70258 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.4□□□□□ -0.58
SgceO70258 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgceO70258 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.4□□□□□ -0.58
SgceO70258 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.4□□□□□ -0.58
SgceO70258 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgceO70258 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.4□□□□□ -0.58
SgceO70258 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgceO70258 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.4□□□□□ -0.58
SgceO70258 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.4□□□□□ -0.58
SgceO70258 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
SgceO70258 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgceO70258 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgceO70258 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SgceO70258 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgceO70258 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
SgceO70258 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgceO70258 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
SgceO70258 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgceO70258 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SgceO70258 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgceO70258 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgceO70258 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.4□□□□□ -0.59
SgceO70258 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.59
SgceO70258 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
SgceO70258 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SgceO70258 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
SgceO70258 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.4□□□□□ -0.59
SgceO70258 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
SgceO70258 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SgceO70258 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgceO70258 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgceO70258 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgceO70258 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SgceO70258 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgceO70258 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgceO70258 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.39□□□□□ -0.59
SgceO70258 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgceO70258 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgceO70258 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
SgceO70258 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.39□□□□□ -0.59
SgceO70258 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgceO70258 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.39□□□□□ -0.59
SgceO70258 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgceO70258 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SgceO70258 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgceO70258 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SgceO70258 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgceO70258 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgceO70258 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.39□□□□□ -0.59
SgceO70258 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgceO70258 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SgceO70258 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
SgceO70258 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgceO70258 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgceO70258 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.39□□□□□ -0.59
SgceO70258 Gm8805-201ENSMUST00000117848 313 ntBASIC11.39□□□□□ -0.59
SgceO70258 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.39□□□□□ -0.59
SgceO70258 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.39□□□□□ -0.59
SgceO70258 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.39□□□□□ -0.59
SgceO70258 Gm8652-201ENSMUST00000181363 964 ntBASIC11.39□□□□□ -0.59
SgceO70258 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgceO70258 Gm7653-201ENSMUST00000214567 508 ntBASIC11.39□□□□□ -0.59
SgceO70258 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.39□□□□□ -0.59
SgceO70258 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.39□□□□□ -0.59
SgceO70258 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgceO70258 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgceO70258 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SgceO70258 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgceO70258 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgceO70258 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgceO70258 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.39□□□□□ -0.59
SgceO70258 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
SgceO70258 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.39□□□□□ -0.59
SgceO70258 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgceO70258 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
SgceO70258 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms