Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Gm44967-201ENSMUST00000207047 631 ntBASIC10.74□□□□□ -0.69
Cxcl13O55038 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.74□□□□□ -0.69
Cxcl13O55038 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.74□□□□□ -0.69
Cxcl13O55038 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cxcl13O55038 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cxcl13O55038 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cxcl13O55038 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cxcl13O55038 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.74□□□□□ -0.69
Cxcl13O55038 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Cxcl13O55038 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cxcl13O55038 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC10.74□□□□□ -0.69
Cxcl13O55038 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cxcl13O55038 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cxcl13O55038 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cxcl13O55038 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Gm37019-201ENSMUST00000192133 2134 ntBASIC10.73□□□□□ -0.69
Cxcl13O55038 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Cxcl13O55038 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Gm15703-201ENSMUST00000120250 880 ntBASIC10.73□□□□□ -0.69
Cxcl13O55038 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.73□□□□□ -0.69
Cxcl13O55038 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.73□□□□□ -0.69
Cxcl13O55038 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.73□□□□□ -0.69
Cxcl13O55038 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.73□□□□□ -0.69
Cxcl13O55038 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.73□□□□□ -0.69
Cxcl13O55038 AA914427-201ENSMUST00000193194 1166 ntBASIC10.73□□□□□ -0.69
Cxcl13O55038 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.73□□□□□ -0.69
Cxcl13O55038 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Cxcl13O55038 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cxcl13O55038 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Cxcl13O55038 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl13O55038 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl13O55038 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl13O55038 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl13O55038 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl13O55038 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl13O55038 Gm45638-201ENSMUST00000211507 2878 ntBASIC10.72□□□□□ -0.69
Cxcl13O55038 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl13O55038 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.72□□□□□ -0.69
Cxcl13O55038 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cxcl13O55038 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl13O55038 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl13O55038 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl13O55038 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl13O55038 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.72□□□□□ -0.69
Cxcl13O55038 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl13O55038 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.72□□□□□ -0.69
Cxcl13O55038 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.72□□□□□ -0.69
Cxcl13O55038 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl13O55038 Gm13665-201ENSMUST00000120830 528 ntBASIC10.72□□□□□ -0.69
Cxcl13O55038 Gm11597-201ENSMUST00000121423 964 ntBASIC10.72□□□□□ -0.69
Cxcl13O55038 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl13O55038 Gm13570-201ENSMUST00000140763 309 ntBASIC10.72□□□□□ -0.69
Cxcl13O55038 Rmrp-201ENSMUST00000157463 271 ntBASIC10.72□□□□□ -0.69
Cxcl13O55038 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl13O55038 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Cxcl13O55038 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.72□□□□□ -0.69
Cxcl13O55038 Gm8885-201ENSMUST00000189382 598 ntBASIC10.72□□□□□ -0.69
Cxcl13O55038 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl13O55038 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC10.72□□□□□ -0.69
Cxcl13O55038 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.72□□□□□ -0.69
Cxcl13O55038 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl13O55038 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.72□□□□□ -0.69
Cxcl13O55038 CT030182.1-201ENSMUST00000225935 533 ntBASIC10.72□□□□□ -0.69
Cxcl13O55038 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.72□□□□□ -0.69
Cxcl13O55038 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl13O55038 Gm10076-201ENSMUST00000073238 384 ntBASIC10.72□□□□□ -0.69
Cxcl13O55038 Gm10312-201ENSMUST00000078515 489 ntBASIC10.72□□□□□ -0.69
Cxcl13O55038 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl13O55038 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl13O55038 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Cxcl13O55038 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl13O55038 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl13O55038 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms