Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Efnb3O35393 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Efnb3O35393 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Efnb3O35393 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.05□□□□□ -0.8
Efnb3O35393 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Efnb3O35393 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
Efnb3O35393 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Efnb3O35393 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC10.05□□□□□ -0.8
Efnb3O35393 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.05□□□□□ -0.8
Efnb3O35393 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Efnb3O35393 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Efnb3O35393 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC10.05□□□□□ -0.8
Efnb3O35393 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Efnb3O35393 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Efnb3O35393 Gm42550-201ENSMUST00000201553 960 ntBASIC10.05□□□□□ -0.8
Efnb3O35393 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Efnb3O35393 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC10.05□□□□□ -0.8
Efnb3O35393 Gm7730-201ENSMUST00000212486 454 ntBASIC10.05□□□□□ -0.8
Efnb3O35393 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.05□□□□□ -0.8
Efnb3O35393 AC139580.1-202ENSMUST00000223574 928 ntBASIC10.05□□□□□ -0.8
Efnb3O35393 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Efnb3O35393 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Efnb3O35393 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Efnb3O35393 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Efnb3O35393 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.05□□□□□ -0.8
Efnb3O35393 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Efnb3O35393 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Efnb3O35393 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Efnb3O35393 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Efnb3O35393 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Efnb3O35393 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Efnb3O35393 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Efnb3O35393 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Efnb3O35393 Gm6263-201ENSMUST00000120029 1342 ntBASIC10.05□□□□□ -0.8
Efnb3O35393 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Efnb3O35393 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Efnb3O35393 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Efnb3O35393 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Efnb3O35393 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Efnb3O35393 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Efnb3O35393 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Efnb3O35393 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.04□□□□□ -0.8
Efnb3O35393 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Efnb3O35393 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Efnb3O35393 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Efnb3O35393 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Efnb3O35393 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Efnb3O35393 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC10.04□□□□□ -0.8
Efnb3O35393 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Efnb3O35393 Gm11978-201ENSMUST00000122315 466 ntBASIC10.04□□□□□ -0.8
Efnb3O35393 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC10.04□□□□□ -0.8
Efnb3O35393 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Efnb3O35393 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.04□□□□□ -0.8
Efnb3O35393 Gm9630-201ENSMUST00000178304 885 ntBASIC10.04□□□□□ -0.8
Efnb3O35393 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.04□□□□□ -0.8
Efnb3O35393 Gm19184-201ENSMUST00000196798 928 ntBASIC10.04□□□□□ -0.8
Efnb3O35393 Gm5279-201ENSMUST00000199575 745 ntBASIC10.04□□□□□ -0.8
Efnb3O35393 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Efnb3O35393 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Efnb3O35393 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.04□□□□□ -0.8
Efnb3O35393 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Efnb3O35393 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Efnb3O35393 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Efnb3O35393 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Efnb3O35393 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.04□□□□□ -0.8
Efnb3O35393 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Efnb3O35393 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Efnb3O35393 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.04□□□□□ -0.8
Efnb3O35393 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Efnb3O35393 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Efnb3O35393 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Efnb3O35393 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Efnb3O35393 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Efnb3O35393 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Efnb3O35393 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Efnb3O35393 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Efnb3O35393 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
Efnb3O35393 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Efnb3O35393 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Efnb3O35393 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Efnb3O35393 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Efnb3O35393 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Efnb3O35393 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.03□□□□□ -0.8
Efnb3O35393 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Efnb3O35393 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.03□□□□□ -0.8
Efnb3O35393 Gm9755-201ENSMUST00000032981 1356 ntBASIC10.03□□□□□ -0.8
Efnb3O35393 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC10.03□□□□□ -0.8
Efnb3O35393 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Mir686-201ENSMUST00000102174 109 ntBASIC10.03□□□□□ -0.8
Efnb3O35393 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Efnb3O35393 Gm22189-201ENSMUST00000103822 86 ntBASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms