Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alx4O35137 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alx4O35137 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alx4O35137 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alx4O35137 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alx4O35137 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alx4O35137 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Alx4O35137 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alx4O35137 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alx4O35137 Gm12341-201ENSMUST00000119724 503 ntBASIC11.34□□□□□ -0.59
Alx4O35137 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.34□□□□□ -0.59
Alx4O35137 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.34□□□□□ -0.59
Alx4O35137 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alx4O35137 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Alx4O35137 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Alx4O35137 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alx4O35137 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.34□□□□□ -0.59
Alx4O35137 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.34□□□□□ -0.59
Alx4O35137 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.34□□□□□ -0.59
Alx4O35137 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.34□□□□□ -0.59
Alx4O35137 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.34□□□□□ -0.59
Alx4O35137 Gm18473-201ENSMUST00000220543 868 ntBASIC11.34□□□□□ -0.59
Alx4O35137 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alx4O35137 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.34□□□□□ -0.59
Alx4O35137 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Alx4O35137 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alx4O35137 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alx4O35137 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.34□□□□□ -0.59
Alx4O35137 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alx4O35137 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alx4O35137 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alx4O35137 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.34□□□□□ -0.59
Alx4O35137 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Alx4O35137 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alx4O35137 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alx4O35137 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Alx4O35137 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alx4O35137 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Alx4O35137 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Alx4O35137 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.59
Alx4O35137 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alx4O35137 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alx4O35137 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alx4O35137 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.33□□□□□ -0.6
Alx4O35137 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alx4O35137 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alx4O35137 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Alx4O35137 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alx4O35137 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alx4O35137 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Alx4O35137 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Alx4O35137 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Alx4O35137 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alx4O35137 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alx4O35137 Gm12384-201ENSMUST00000119228 919 ntBASIC11.33□□□□□ -0.6
Alx4O35137 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Alx4O35137 Gm6152-201ENSMUST00000151704 340 ntBASIC11.33□□□□□ -0.6
Alx4O35137 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.33□□□□□ -0.6
Alx4O35137 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Alx4O35137 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.33□□□□□ -0.6
Alx4O35137 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.33□□□□□ -0.6
Alx4O35137 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Alx4O35137 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Alx4O35137 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Alx4O35137 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alx4O35137 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.33□□□□□ -0.6
Alx4O35137 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alx4O35137 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alx4O35137 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alx4O35137 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alx4O35137 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alx4O35137 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alx4O35137 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.33□□□□□ -0.6
Alx4O35137 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Alx4O35137 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alx4O35137 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alx4O35137 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Alx4O35137 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
Alx4O35137 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alx4O35137 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Alx4O35137 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Alx4O35137 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.33□□□□□ -0.6
Alx4O35137 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Alx4O35137 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alx4O35137 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Alx4O35137 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Alx4O35137 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Alx4O35137 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Alx4O35137 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Alx4O35137 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.32□□□□□ -0.6
Alx4O35137 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Alx4O35137 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Alx4O35137 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Alx4O35137 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Alx4O35137 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Alx4O35137 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Alx4O35137 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Alx4O35137 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Alx4O35137 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Alx4O35137 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms