Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf3O08791 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf3O08791 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.22□□□□□ -0.29
Ebf3O08791 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.22□□□□□ -0.29
Ebf3O08791 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.22□□□□□ -0.29
Ebf3O08791 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf3O08791 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ebf3O08791 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf3O08791 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf3O08791 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf3O08791 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf3O08791 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.22□□□□□ -0.29
Ebf3O08791 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf3O08791 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf3O08791 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf3O08791 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf3O08791 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.22□□□□□ -0.29
Ebf3O08791 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.22□□□□□ -0.29
Ebf3O08791 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf3O08791 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ebf3O08791 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.22□□□□□ -0.29
Ebf3O08791 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.21□□□□□ -0.29
Ebf3O08791 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ebf3O08791 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf3O08791 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Ebf3O08791 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf3O08791 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf3O08791 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf3O08791 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf3O08791 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.21□□□□□ -0.29
Ebf3O08791 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.21□□□□□ -0.29
Ebf3O08791 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf3O08791 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf3O08791 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf3O08791 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf3O08791 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ebf3O08791 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf3O08791 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf3O08791 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Ebf3O08791 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf3O08791 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf3O08791 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ebf3O08791 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf3O08791 Gm22121-201ENSMUST00000175148 54 ntBASIC13.21□□□□□ -0.29
Ebf3O08791 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.21□□□□□ -0.29
Ebf3O08791 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.21□□□□□ -0.29
Ebf3O08791 Gm31256-201ENSMUST00000194705 506 ntBASIC13.21□□□□□ -0.29
Ebf3O08791 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.21□□□□□ -0.29
Ebf3O08791 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.21□□□□□ -0.29
Ebf3O08791 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf3O08791 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf3O08791 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf3O08791 Paupar-201ENSMUST00000194826 3482 ntBASIC13.21□□□□□ -0.29
Ebf3O08791 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf3O08791 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf3O08791 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf3O08791 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.21□□□□□ -0.29
Ebf3O08791 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.21□□□□□ -0.3
Ebf3O08791 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ebf3O08791 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ebf3O08791 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ebf3O08791 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ebf3O08791 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.21□□□□□ -0.3
Ebf3O08791 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Ebf3O08791 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ebf3O08791 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf3O08791 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf3O08791 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf3O08791 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf3O08791 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ebf3O08791 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf3O08791 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf3O08791 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf3O08791 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf3O08791 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf3O08791 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf3O08791 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf3O08791 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Ebf3O08791 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.2□□□□□ -0.3
Ebf3O08791 Gm24830-201ENSMUST00000102024 166 ntBASIC13.2□□□□□ -0.3
Ebf3O08791 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf3O08791 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.2□□□□□ -0.3
Ebf3O08791 Gm25890-201ENSMUST00000177643 165 ntBASIC13.2□□□□□ -0.3
Ebf3O08791 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.2□□□□□ -0.3
Ebf3O08791 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.2□□□□□ -0.3
Ebf3O08791 Gm22614-201ENSMUST00000178300 165 ntBASIC13.2□□□□□ -0.3
Ebf3O08791 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ebf3O08791 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.2□□□□□ -0.3
Ebf3O08791 Gm5904-201ENSMUST00000210286 865 ntBASIC13.2□□□□□ -0.3
Ebf3O08791 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.2□□□□□ -0.3
Ebf3O08791 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.2□□□□□ -0.3
Ebf3O08791 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf3O08791 Gm22042-201ENSMUST00000082989 165 ntBASIC13.2□□□□□ -0.3
Ebf3O08791 Gm26232-201ENSMUST00000083360 166 ntBASIC13.2□□□□□ -0.3
Ebf3O08791 Gm24136-201ENSMUST00000083374 165 ntBASIC13.2□□□□□ -0.3
Ebf3O08791 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.2□□□□□ -0.3
Ebf3O08791 Gm26110-201ENSMUST00000083971 165 ntBASIC13.2□□□□□ -0.3
Ebf3O08791 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf3O08791 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.2□□□□□ -0.3
Ebf3O08791 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms