Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Gm23045-201ENSMUST00000175041 96 ntBASIC10.19□□□□□ -0.78
Chd6A3KFM7 Gm38103-201ENSMUST00000191707 864 ntBASIC10.19□□□□□ -0.78
Chd6A3KFM7 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC10.19□□□□□ -0.78
Chd6A3KFM7 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.19□□□□□ -0.78
Chd6A3KFM7 Gm23680-201ENSMUST00000083162 164 ntBASIC10.19□□□□□ -0.78
Chd6A3KFM7 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Gm14193-201ENSMUST00000105067 153 ntBASIC10.19□□□□□ -0.78
Chd6A3KFM7 Gm12856-201ENSMUST00000119471 1293 ntBASIC10.19□□□□□ -0.78
Chd6A3KFM7 Gm14993-201ENSMUST00000121180 164 ntBASIC10.19□□□□□ -0.78
Chd6A3KFM7 Gm16459-201ENSMUST00000121443 686 ntBASIC10.19□□□□□ -0.78
Chd6A3KFM7 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Gm4811-201ENSMUST00000220879 1220 ntBASIC10.19□□□□□ -0.78
Chd6A3KFM7 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Gm6564-201ENSMUST00000075377 619 ntBASIC10.19□□□□□ -0.78
Chd6A3KFM7 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Gm23085-201ENSMUST00000157849 293 ntBASIC10.18□□□□□ -0.78
Chd6A3KFM7 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.18□□□□□ -0.78
Chd6A3KFM7 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Gm28182-201ENSMUST00000188354 2477 ntBASIC10.18□□□□□ -0.78
Chd6A3KFM7 Psmf1-202ENSMUST00000109869 1384 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Gm24279-201ENSMUST00000104236 131 ntBASIC10.18□□□□□ -0.78
Chd6A3KFM7 Gm11619-201ENSMUST00000117474 237 ntBASIC10.18□□□□□ -0.78
Chd6A3KFM7 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Gm25394-201ENSMUST00000157338 133 ntBASIC10.18□□□□□ -0.78
Chd6A3KFM7 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC10.18□□□□□ -0.78
Chd6A3KFM7 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms