Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb1A2AQ07 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb1A2AQ07 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb1A2AQ07 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb1A2AQ07 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb1A2AQ07 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb1A2AQ07 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13□□□□□ -0.33
Tubb1A2AQ07 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb1A2AQ07 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13□□□□□ -0.33
Tubb1A2AQ07 Gm4768-201ENSMUST00000206199 686 ntBASIC13□□□□□ -0.33
Tubb1A2AQ07 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13□□□□□ -0.33
Tubb1A2AQ07 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb1A2AQ07 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb1A2AQ07 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Tubb1A2AQ07 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb1A2AQ07 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb1A2AQ07 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb1A2AQ07 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb1A2AQ07 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb1A2AQ07 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb1A2AQ07 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb1A2AQ07 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13□□□□□ -0.33
Tubb1A2AQ07 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb1A2AQ07 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Matn2-203ENSMUST00000226766 3252 ntBASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Gm7653-201ENSMUST00000214567 508 ntBASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tubb1A2AQ07 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.98□□□□□ -0.33
Tubb1A2AQ07 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.98□□□□□ -0.33
Tubb1A2AQ07 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb1A2AQ07 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb1A2AQ07 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb1A2AQ07 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb1A2AQ07 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb1A2AQ07 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.98□□□□□ -0.33
Tubb1A2AQ07 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb1A2AQ07 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.98□□□□□ -0.33
Tubb1A2AQ07 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb1A2AQ07 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb1A2AQ07 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb1A2AQ07 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Tubb1A2AQ07 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb1A2AQ07 Gm16177-201ENSMUST00000120728 718 ntBASIC12.98□□□□□ -0.33
Tubb1A2AQ07 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb1A2AQ07 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb1A2AQ07 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.98□□□□□ -0.33
Tubb1A2AQ07 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb1A2AQ07 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb1A2AQ07 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb1A2AQ07 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb1A2AQ07 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb1A2AQ07 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Tubb1A2AQ07 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb1A2AQ07 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Tubb1A2AQ07 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Tubb1A2AQ07 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.98□□□□□ -0.33
Tubb1A2AQ07 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb1A2AQ07 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb1A2AQ07 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.97□□□□□ -0.33
Tubb1A2AQ07 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tubb1A2AQ07 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Tubb1A2AQ07 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tubb1A2AQ07 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 187 ms