Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Gm6963-201ENSMUST00000147879 379 ntBASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Gm24749-201ENSMUST00000157838 343 ntBASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Gm43947-201ENSMUST00000203019 959 ntBASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3854A0A1B0GSS6 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Gm13813-201ENSMUST00000120998 787 ntBASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Gm39404-201ENSMUST00000216350 313 ntBASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Gm10076-201ENSMUST00000073238 384 ntBASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3854A0A1B0GSS6 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Gm13315-201ENSMUST00000120376 991 ntBASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Gm22334-201ENSMUST00000158070 133 ntBASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Gm32999-201ENSMUST00000192693 562 ntBASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Gm7003-201ENSMUST00000195089 312 ntBASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Gm8959-201ENSMUST00000213150 571 ntBASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.68□□□□□ -0.38
Gm3854A0A1B0GSS6 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms