Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Trav3n-3A0A0G2JEM0 AC129336.1-201ENSMUST00000220224 2277 ntBASIC9.65□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Mir449b-201ENSMUST00000104833 80 ntBASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm27525-201ENSMUST00000184465 107 ntBASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm27397-201ENSMUST00000184997 107 ntBASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 CT943659.1-201ENSMUST00000215459 326 ntBASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC9.64□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 AC154517.2-201ENSMUST00000220829 2458 ntBASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm18905-201ENSMUST00000205454 928 ntBASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms