Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Gm11978-201ENSMUST00000122315 466 ntBASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Gm18473-201ENSMUST00000220543 868 ntBASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5-4A0A075B652 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms