Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Gm15770-201ENSMUST00000117498 584 ntBASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Gm12260-201ENSMUST00000122447 411 ntBASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Ighv1-25-201ENSMUST00000195638 345 ntBASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Gm20553-201ENSMUST00000204205 844 ntBASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Mzt1-203ENSMUST00000227948 952 ntBASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Gm38273-201ENSMUST00000194987 2382 ntBASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Nrn1-204ENSMUST00000224323 1779 ntBASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC9.09□□□□□ -0.95
Trav8-1A0A075B641 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.96
Trav8-1A0A075B641 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC9.09□□□□□ -0.96
Trav8-1A0A075B641 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.96
Trav8-1A0A075B641 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 AC154639.1-201ENSMUST00000224393 2849 ntBASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Gm45453-201ENSMUST00000211758 853 ntBASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms