Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb3S4R1G7 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.47□□□□□ -0.57
H2afb3S4R1G7 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb3S4R1G7 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb3S4R1G7 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
H2afb3S4R1G7 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
H2afb3S4R1G7 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.47□□□□□ -0.57
H2afb3S4R1G7 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.47□□□□□ -0.57
H2afb3S4R1G7 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb3S4R1G7 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb3S4R1G7 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.47□□□□□ -0.57
H2afb3S4R1G7 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb3S4R1G7 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
H2afb3S4R1G7 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb3S4R1G7 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
H2afb3S4R1G7 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb3S4R1G7 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.47□□□□□ -0.57
H2afb3S4R1G7 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
H2afb3S4R1G7 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb3S4R1G7 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb3S4R1G7 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb3S4R1G7 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb3S4R1G7 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb3S4R1G7 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb3S4R1G7 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb3S4R1G7 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.46□□□□□ -0.57
H2afb3S4R1G7 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb3S4R1G7 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb3S4R1G7 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb3S4R1G7 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.46□□□□□ -0.57
H2afb3S4R1G7 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb3S4R1G7 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.46□□□□□ -0.57
H2afb3S4R1G7 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb3S4R1G7 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.46□□□□□ -0.57
H2afb3S4R1G7 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb3S4R1G7 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb3S4R1G7 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb3S4R1G7 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
H2afb3S4R1G7 Gm12928-201ENSMUST00000117115 573 ntBASIC11.46□□□□□ -0.57
H2afb3S4R1G7 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.46□□□□□ -0.57
H2afb3S4R1G7 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.46□□□□□ -0.57
H2afb3S4R1G7 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb3S4R1G7 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.46□□□□□ -0.57
H2afb3S4R1G7 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.46□□□□□ -0.57
H2afb3S4R1G7 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.46□□□□□ -0.57
H2afb3S4R1G7 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.46□□□□□ -0.57
H2afb3S4R1G7 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.46□□□□□ -0.57
H2afb3S4R1G7 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.46□□□□□ -0.57
H2afb3S4R1G7 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb3S4R1G7 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb3S4R1G7 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.46□□□□□ -0.57
H2afb3S4R1G7 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb3S4R1G7 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
H2afb3S4R1G7 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
H2afb3S4R1G7 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
H2afb3S4R1G7 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
H2afb3S4R1G7 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
H2afb3S4R1G7 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.46□□□□□ -0.58
H2afb3S4R1G7 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.46□□□□□ -0.58
H2afb3S4R1G7 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
H2afb3S4R1G7 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
H2afb3S4R1G7 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
H2afb3S4R1G7 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
H2afb3S4R1G7 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
H2afb3S4R1G7 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
H2afb3S4R1G7 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
H2afb3S4R1G7 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
H2afb3S4R1G7 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
H2afb3S4R1G7 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
H2afb3S4R1G7 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
H2afb3S4R1G7 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms