Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 Gm13315-201ENSMUST00000120376 991 ntBASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 Gm11793-201ENSMUST00000120433 981 ntBASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 Gm11597-201ENSMUST00000121423 964 ntBASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 Gm27572-201ENSMUST00000183702 255 ntBASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3aQ9JKX8 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Gm13786-201ENSMUST00000122371 333 ntBASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Rmrp-201ENSMUST00000157463 271 ntBASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Gm42627-201ENSMUST00000197347 224 ntBASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3aQ9JKX8 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3aQ9JKX8 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3aQ9JKX8 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3aQ9JKX8 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Upk3aQ9JKX8 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3aQ9JKX8 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3aQ9JKX8 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3aQ9JKX8 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3aQ9JKX8 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3aQ9JKX8 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3aQ9JKX8 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3aQ9JKX8 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Upk3aQ9JKX8 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.21□□□□□ -0.45
Upk3aQ9JKX8 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.21□□□□□ -0.45
Upk3aQ9JKX8 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3aQ9JKX8 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Upk3aQ9JKX8 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3aQ9JKX8 Gm42693-201ENSMUST00000196779 631 ntBASIC12.21□□□□□ -0.45
Upk3aQ9JKX8 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3aQ9JKX8 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.21□□□□□ -0.45
Upk3aQ9JKX8 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.21□□□□□ -0.45
Upk3aQ9JKX8 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3aQ9JKX8 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3aQ9JKX8 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms