Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
OtofQ9ESF1 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Gm45433-201ENSMUST00000209386 247 ntBASIC12.56□□□□□ -0.4
OtofQ9ESF1 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
OtofQ9ESF1 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Gm5070-201ENSMUST00000177599 862 ntBASIC12.55□□□□□ -0.4
OtofQ9ESF1 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.55□□□□□ -0.4
OtofQ9ESF1 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.55□□□□□ -0.4
OtofQ9ESF1 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.55□□□□□ -0.4
OtofQ9ESF1 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
OtofQ9ESF1 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
OtofQ9ESF1 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.54□□□□□ -0.4
OtofQ9ESF1 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.54□□□□□ -0.4
OtofQ9ESF1 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Gm37666-201ENSMUST00000194110 866 ntBASIC12.54□□□□□ -0.4
OtofQ9ESF1 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
OtofQ9ESF1 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.54□□□□□ -0.4
OtofQ9ESF1 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.54□□□□□ -0.4
OtofQ9ESF1 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.54□□□□□ -0.4
OtofQ9ESF1 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.54□□□□□ -0.4
OtofQ9ESF1 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Gm10051-201ENSMUST00000145209 414 ntBASIC12.54□□□□□ -0.4
OtofQ9ESF1 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Gm9022-201ENSMUST00000182482 992 ntBASIC12.54□□□□□ -0.4
OtofQ9ESF1 Gm9555-201ENSMUST00000200908 583 ntBASIC12.54□□□□□ -0.4
OtofQ9ESF1 Gm19208-201ENSMUST00000213861 912 ntBASIC12.54□□□□□ -0.4
OtofQ9ESF1 Gm9996-201ENSMUST00000070359 913 ntBASIC12.54□□□□□ -0.4
OtofQ9ESF1 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
OtofQ9ESF1 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms