Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Gm15371-201ENSMUST00000117057 784 ntBASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Gm45668-201ENSMUST00000211271 493 ntBASIC12.56□□□□□ -0.4
Lima1Q9ERG0 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Gm26315-201ENSMUST00000083890 321 ntBASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Lima1Q9ERG0 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lima1Q9ERG0 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms