Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.95□□□□□ -0.5
Rtp4Q9ER80 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Pck2-205ENSMUST00000226352 2784 ntBASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.95□□□□□ -0.5
Rtp4Q9ER80 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rtp4Q9ER80 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Gm16479-201ENSMUST00000121706 932 ntBASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Gm2231-201ENSMUST00000125661 612 ntBASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rtp4Q9ER80 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms