Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Gm13392-201ENSMUST00000117708 150 ntBASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Gm24548-201ENSMUST00000158650 108 ntBASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tmem54Q9D7S1 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Gm27572-201ENSMUST00000183702 255 ntBASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Gm43133-201ENSMUST00000197472 463 ntBASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Gm10478-201ENSMUST00000084451 396 ntBASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.15□□□□□ -0.62
Tmem54Q9D7S1 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Tmem54Q9D7S1 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Tmem54Q9D7S1 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.14□□□□□ -0.63
Tmem54Q9D7S1 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.14□□□□□ -0.63
Tmem54Q9D7S1 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Tmem54Q9D7S1 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.14□□□□□ -0.63
Tmem54Q9D7S1 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tmem54Q9D7S1 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Tmem54Q9D7S1 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tmem54Q9D7S1 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tmem54Q9D7S1 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms