Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps33aQ9D2N9 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Vps33aQ9D2N9 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps33aQ9D2N9 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps33aQ9D2N9 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps33aQ9D2N9 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps33aQ9D2N9 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps33aQ9D2N9 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps33aQ9D2N9 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps33aQ9D2N9 Btrc-209ENSMUST00000224478 2194 ntBASIC13.47□□□□□ -0.25
Vps33aQ9D2N9 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC13.46□□□□□ -0.25
Vps33aQ9D2N9 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps33aQ9D2N9 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps33aQ9D2N9 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps33aQ9D2N9 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.46□□□□□ -0.25
Vps33aQ9D2N9 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC13.46□□□□□ -0.25
Vps33aQ9D2N9 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps33aQ9D2N9 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps33aQ9D2N9 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps33aQ9D2N9 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps33aQ9D2N9 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps33aQ9D2N9 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps33aQ9D2N9 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC13.46□□□□□ -0.25
Vps33aQ9D2N9 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Vps33aQ9D2N9 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps33aQ9D2N9 Gm25287-201ENSMUST00000103846 110 ntBASIC13.46□□□□□ -0.25
Vps33aQ9D2N9 Gm22918-201ENSMUST00000103855 110 ntBASIC13.46□□□□□ -0.25
Vps33aQ9D2N9 Gm15240-201ENSMUST00000118156 720 ntBASIC13.46□□□□□ -0.25
Vps33aQ9D2N9 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.46□□□□□ -0.25
Vps33aQ9D2N9 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Vps33aQ9D2N9 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps33aQ9D2N9 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Vps33aQ9D2N9 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps33aQ9D2N9 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Vps33aQ9D2N9 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps33aQ9D2N9 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps33aQ9D2N9 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps33aQ9D2N9 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps33aQ9D2N9 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps33aQ9D2N9 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Vps33aQ9D2N9 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Vps33aQ9D2N9 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps33aQ9D2N9 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Vps33aQ9D2N9 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps33aQ9D2N9 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Vps33aQ9D2N9 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps33aQ9D2N9 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps33aQ9D2N9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 AC166359.1-201ENSMUST00000220243 1871 ntBASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Gm24447-201ENSMUST00000083977 338 ntBASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Gm38292-201ENSMUST00000192646 3045 ntBASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Gm43860-201ENSMUST00000201742 2705 ntBASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.45□□□□□ -0.26
Vps33aQ9D2N9 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps33aQ9D2N9 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Vps33aQ9D2N9 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.44□□□□□ -0.26
Vps33aQ9D2N9 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps33aQ9D2N9 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13.44□□□□□ -0.26
Vps33aQ9D2N9 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps33aQ9D2N9 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps33aQ9D2N9 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps33aQ9D2N9 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps33aQ9D2N9 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Vps33aQ9D2N9 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps33aQ9D2N9 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps33aQ9D2N9 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps33aQ9D2N9 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps33aQ9D2N9 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps33aQ9D2N9 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps33aQ9D2N9 Gm27772-201ENSMUST00000184900 187 ntBASIC13.44□□□□□ -0.26
Vps33aQ9D2N9 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.44□□□□□ -0.26
Vps33aQ9D2N9 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps33aQ9D2N9 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms