Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Gm6736-201ENSMUST00000166583 948 ntBASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Mir7684-201ENSMUST00000183858 60 ntBASIC12.62□□□□□ -0.39
Ssu72Q9CY97 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssu72Q9CY97 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Gm15321-201ENSMUST00000121290 288 ntBASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Gm27702-201ENSMUST00000184512 56 ntBASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Gm27989-201ENSMUST00000184721 107 ntBASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Gm19891-201ENSMUST00000189771 303 ntBASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssu72Q9CY97 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms