Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Mir6977-201ENSMUST00000184960 64 ntBASIC12.05□□□□□ -0.48
Ska1Q9CPV1 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.05□□□□□ -0.48
Ska1Q9CPV1 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska1Q9CPV1 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Gm44855-201ENSMUST00000205725 362 ntBASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Gm18307-201ENSMUST00000206864 949 ntBASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Gm6218-201ENSMUST00000219812 628 ntBASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Gm26315-201ENSMUST00000083890 321 ntBASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ska1Q9CPV1 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms