Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tlr3Q99MB1 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Gm14723-201ENSMUST00000118686 215 ntBASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Gm43822-201ENSMUST00000200285 476 ntBASIC13.66□□□□□ -0.22
Tlr3Q99MB1 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tlr3Q99MB1 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.65□□□□□ -0.22
Tlr3Q99MB1 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.65□□□□□ -0.22
Tlr3Q99MB1 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms