Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Gm11618-201ENSMUST00000117946 267 ntBASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp1b1Q99LU0 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.04□□□□□ -0.48
Chmp1b1Q99LU0 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Chmp1b1Q99LU0 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp1b1Q99LU0 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp1b1Q99LU0 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Chmp1b1Q99LU0 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp1b1Q99LU0 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp1b1Q99LU0 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp1b1Q99LU0 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp1b1Q99LU0 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Chmp1b1Q99LU0 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp1b1Q99LU0 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp1b1Q99LU0 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Chmp1b1Q99LU0 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp1b1Q99LU0 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.04□□□□□ -0.48
Chmp1b1Q99LU0 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.04□□□□□ -0.48
Chmp1b1Q99LU0 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Chmp1b1Q99LU0 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms