Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clp1Q99LI9 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.4□□□□□ -0.26
Clp1Q99LI9 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clp1Q99LI9 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clp1Q99LI9 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Clp1Q99LI9 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.39□□□□□ -0.27
Clp1Q99LI9 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.39□□□□□ -0.27
Clp1Q99LI9 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.39□□□□□ -0.27
Clp1Q99LI9 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Gm19994-201ENSMUST00000217086 586 ntBASIC13.39□□□□□ -0.27
Clp1Q99LI9 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.39□□□□□ -0.27
Clp1Q99LI9 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.39□□□□□ -0.27
Clp1Q99LI9 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clp1Q99LI9 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.39□□□□□ -0.27
Clp1Q99LI9 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clp1Q99LI9 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Clp1Q99LI9 AC154849.3-201ENSMUST00000223733 1660 ntBASIC13.38□□□□□ -0.27
Clp1Q99LI9 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.38□□□□□ -0.27
Clp1Q99LI9 Gm13035-201ENSMUST00000117496 342 ntBASIC13.38□□□□□ -0.27
Clp1Q99LI9 Gm14665-201ENSMUST00000122294 557 ntBASIC13.38□□□□□ -0.27
Clp1Q99LI9 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.38□□□□□ -0.27
Clp1Q99LI9 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Gm44126-201ENSMUST00000204831 514 ntBASIC13.38□□□□□ -0.27
Clp1Q99LI9 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Gm8285-201ENSMUST00000208293 759 ntBASIC13.38□□□□□ -0.27
Clp1Q99LI9 Gm32390-201ENSMUST00000212713 1172 ntBASIC13.38□□□□□ -0.27
Clp1Q99LI9 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.38□□□□□ -0.27
Clp1Q99LI9 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clp1Q99LI9 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Clp1Q99LI9 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Clp1Q99LI9 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Clp1Q99LI9 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Clp1Q99LI9 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clp1Q99LI9 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.37□□□□□ -0.27
Clp1Q99LI9 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clp1Q99LI9 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Clp1Q99LI9 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Clp1Q99LI9 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Clp1Q99LI9 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms