Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Smarcd2Q99JR8 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Smarcd2Q99JR8 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Smarcd2Q99JR8 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Gm29615-201ENSMUST00000185371 697 ntBASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Gm28224-201ENSMUST00000186078 697 ntBASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Gm29001-201ENSMUST00000186177 697 ntBASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Gm28292-201ENSMUST00000186593 697 ntBASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Gm28101-201ENSMUST00000187608 697 ntBASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Gm29076-201ENSMUST00000187689 697 ntBASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Gm28302-201ENSMUST00000187931 697 ntBASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Gm28646-201ENSMUST00000188220 697 ntBASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Gm28205-201ENSMUST00000189177 697 ntBASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Gm29032-201ENSMUST00000189797 697 ntBASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Gm28695-201ENSMUST00000190300 697 ntBASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Gm37448-201ENSMUST00000192795 697 ntBASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd2Q99JR8 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Gm15703-201ENSMUST00000120250 880 ntBASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Rmrp-201ENSMUST00000157463 271 ntBASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.82□□□□□ -0.36
Smarcd2Q99JR8 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms