Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.84□□□□□ -0.35
Cdk9Q99J95 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.84□□□□□ -0.35
Cdk9Q99J95 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Gm15487-201ENSMUST00000122373 465 ntBASIC12.84□□□□□ -0.35
Cdk9Q99J95 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Gm27437-201ENSMUST00000183429 107 ntBASIC12.84□□□□□ -0.35
Cdk9Q99J95 Gm27838-201ENSMUST00000184829 128 ntBASIC12.84□□□□□ -0.35
Cdk9Q99J95 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.84□□□□□ -0.35
Cdk9Q99J95 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.84□□□□□ -0.35
Cdk9Q99J95 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk9Q99J95 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.84□□□□□ -0.35
Cdk9Q99J95 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk9Q99J95 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cdk9Q99J95 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Cdk9Q99J95 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cdk9Q99J95 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.83□□□□□ -0.35
Cdk9Q99J95 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk9Q99J95 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk9Q99J95 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk9Q99J95 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk9Q99J95 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.83□□□□□ -0.36
Cdk9Q99J95 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk9Q99J95 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk9Q99J95 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
Cdk9Q99J95 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk9Q99J95 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk9Q99J95 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk9Q99J95 Gm14719-201ENSMUST00000121891 340 ntBASIC12.83□□□□□ -0.36
Cdk9Q99J95 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.83□□□□□ -0.36
Cdk9Q99J95 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.83□□□□□ -0.36
Cdk9Q99J95 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.83□□□□□ -0.36
Cdk9Q99J95 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.83□□□□□ -0.36
Cdk9Q99J95 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk9Q99J95 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk9Q99J95 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.83□□□□□ -0.36
Cdk9Q99J95 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk9Q99J95 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk9Q99J95 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk9Q99J95 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.83□□□□□ -0.36
Cdk9Q99J95 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk9Q99J95 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk9Q99J95 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk9Q99J95 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk9Q99J95 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.83□□□□□ -0.36
Cdk9Q99J95 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.83□□□□□ -0.36
Cdk9Q99J95 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk9Q99J95 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.82□□□□□ -0.36
Cdk9Q99J95 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Gm12485-201ENSMUST00000119641 291 ntBASIC12.82□□□□□ -0.36
Cdk9Q99J95 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk9Q99J95 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk9Q99J95 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms