Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clip1Q922J3 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clip1Q922J3 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clip1Q922J3 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Clip1Q922J3 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clip1Q922J3 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clip1Q922J3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Clip1Q922J3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC19.8■□□□□ 0.76
Clip1Q922J3 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clip1Q922J3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clip1Q922J3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Clip1Q922J3 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clip1Q922J3 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Clip1Q922J3 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clip1Q922J3 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Clip1Q922J3 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clip1Q922J3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC19.8■□□□□ 0.76
Clip1Q922J3 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clip1Q922J3 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC19.8■□□□□ 0.76
Clip1Q922J3 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC19.8■□□□□ 0.76
Clip1Q922J3 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC19.8■□□□□ 0.76
Clip1Q922J3 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC19.8■□□□□ 0.76
Clip1Q922J3 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clip1Q922J3 Gm44136-201ENSMUST00000203819 1106 ntBASIC19.8■□□□□ 0.76
Clip1Q922J3 Gm44100-201ENSMUST00000204329 436 ntBASIC19.8■□□□□ 0.76
Clip1Q922J3 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Clip1Q922J3 Gm14267-206ENSMUST00000226870 1209 ntBASIC19.8■□□□□ 0.76
Clip1Q922J3 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clip1Q922J3 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Clip1Q922J3 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clip1Q922J3 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clip1Q922J3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Clip1Q922J3 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Clip1Q922J3 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clip1Q922J3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clip1Q922J3 Gm43858-201ENSMUST00000199418 1778 ntBASIC19.8■□□□□ 0.76
Clip1Q922J3 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clip1Q922J3 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Clip1Q922J3 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clip1Q922J3 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Clip1Q922J3 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Clip1Q922J3 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Clip1Q922J3 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clip1Q922J3 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clip1Q922J3 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Clip1Q922J3 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clip1Q922J3 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clip1Q922J3 Gm24231-201ENSMUST00000104315 133 ntBASIC19.79■□□□□ 0.76
Clip1Q922J3 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clip1Q922J3 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Clip1Q922J3 n-R5s14-201ENSMUST00000122688 107 ntBASIC19.79■□□□□ 0.76
Clip1Q922J3 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC19.79■□□□□ 0.76
Clip1Q922J3 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC19.79■□□□□ 0.76
Clip1Q922J3 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Clip1Q922J3 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC19.79■□□□□ 0.76
Clip1Q922J3 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Clip1Q922J3 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC19.79■□□□□ 0.76
Clip1Q922J3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clip1Q922J3 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC19.79■□□□□ 0.76
Clip1Q922J3 Retreg1-206ENSMUST00000228306 1430 ntBASIC19.79■□□□□ 0.76
Clip1Q922J3 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Clip1Q922J3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Clip1Q922J3 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clip1Q922J3 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Clip1Q922J3 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC19.78■□□□□ 0.76
Clip1Q922J3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clip1Q922J3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clip1Q922J3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clip1Q922J3 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clip1Q922J3 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clip1Q922J3 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Clip1Q922J3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clip1Q922J3 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clip1Q922J3 Gm23949-201ENSMUST00000104027 127 ntBASIC19.78■□□□□ 0.76
Clip1Q922J3 Gm6335-201ENSMUST00000118081 1194 ntBASIC19.78■□□□□ 0.76
Clip1Q922J3 Gm7816-201ENSMUST00000119884 1194 ntBASIC19.78■□□□□ 0.76
Clip1Q922J3 Gm15542-201ENSMUST00000121585 1194 ntBASIC19.78■□□□□ 0.76
Clip1Q922J3 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC19.78■□□□□ 0.76
Clip1Q922J3 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clip1Q922J3 Gm29615-201ENSMUST00000185371 697 ntBASIC19.78■□□□□ 0.76
Clip1Q922J3 Gm28224-201ENSMUST00000186078 697 ntBASIC19.78■□□□□ 0.76
Clip1Q922J3 Gm29001-201ENSMUST00000186177 697 ntBASIC19.78■□□□□ 0.76
Clip1Q922J3 Gm28292-201ENSMUST00000186593 697 ntBASIC19.78■□□□□ 0.76
Clip1Q922J3 Gm28101-201ENSMUST00000187608 697 ntBASIC19.78■□□□□ 0.76
Clip1Q922J3 Gm29076-201ENSMUST00000187689 697 ntBASIC19.78■□□□□ 0.76
Clip1Q922J3 Gm28302-201ENSMUST00000187931 697 ntBASIC19.78■□□□□ 0.76
Clip1Q922J3 Gm28646-201ENSMUST00000188220 697 ntBASIC19.78■□□□□ 0.76
Clip1Q922J3 Gm28205-201ENSMUST00000189177 697 ntBASIC19.78■□□□□ 0.76
Clip1Q922J3 Gm29032-201ENSMUST00000189797 697 ntBASIC19.78■□□□□ 0.76
Clip1Q922J3 Gm28695-201ENSMUST00000190300 697 ntBASIC19.78■□□□□ 0.76
Clip1Q922J3 Gm37448-201ENSMUST00000192795 697 ntBASIC19.78■□□□□ 0.76
Clip1Q922J3 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC19.78■□□□□ 0.76
Clip1Q922J3 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC19.78■□□□□ 0.76
Clip1Q922J3 AC154252.2-201ENSMUST00000223593 767 ntBASIC19.78■□□□□ 0.76
Clip1Q922J3 Gm10371-202ENSMUST00000228010 1081 ntBASIC19.78■□□□□ 0.76
Clip1Q922J3 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clip1Q922J3 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clip1Q922J3 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clip1Q922J3 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clip1Q922J3 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms