Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhac1Q91Y10 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhac1Q91Y10 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhac1Q91Y10 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhac1Q91Y10 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.93□□□□□ -0.5
Pcdhac1Q91Y10 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhac1Q91Y10 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhac1Q91Y10 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdhac1Q91Y10 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhac1Q91Y10 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhac1Q91Y10 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdhac1Q91Y10 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhac1Q91Y10 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Gm11478-201ENSMUST00000117851 599 ntBASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Gm12138-201ENSMUST00000122180 951 ntBASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Gm7653-201ENSMUST00000214567 508 ntBASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Gm17794-201ENSMUST00000220252 955 ntBASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.92□□□□□ -0.5
Pcdhac1Q91Y10 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Gm11424-201ENSMUST00000121929 829 ntBASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Gm11978-201ENSMUST00000122315 466 ntBASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Gm6152-201ENSMUST00000151704 340 ntBASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Gm7287-201ENSMUST00000205267 602 ntBASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhac1Q91Y10 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Pcdhac1Q91Y10 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhac1Q91Y10 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhac1Q91Y10 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhac1Q91Y10 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhac1Q91Y10 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms