Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Gm23984-201ENSMUST00000157139 203 ntBASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Gm6180-201ENSMUST00000065243 498 ntBASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pcdhb4Q91XZ6 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Mir686-201ENSMUST00000102174 109 ntBASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Gm8515-201ENSMUST00000194852 576 ntBASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Gm38671-201ENSMUST00000200573 130 ntBASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms