Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.22□□□□□ -0.45
Lsm1Q8VC85 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Gm11803-201ENSMUST00000119966 444 ntBASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Gm16479-201ENSMUST00000121706 932 ntBASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Gm12091-201ENSMUST00000146791 830 ntBASIC12.21□□□□□ -0.45
Lsm1Q8VC85 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Gm22121-201ENSMUST00000175148 54 ntBASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Matn2-203ENSMUST00000226766 3252 ntBASIC12.21□□□□□ -0.45
Lsm1Q8VC85 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm1Q8VC85 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm1Q8VC85 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm1Q8VC85 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm1Q8VC85 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm1Q8VC85 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm1Q8VC85 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm1Q8VC85 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm1Q8VC85 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm1Q8VC85 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm1Q8VC85 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm1Q8VC85 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Gm8810-201ENSMUST00000172895 754 ntBASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Gm9630-201ENSMUST00000178304 885 ntBASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.2□□□□□ -0.46
Lsm1Q8VC85 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Gm10576-201ENSMUST00000191927 825 ntBASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Gm6180-201ENSMUST00000065243 498 ntBASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm1Q8VC85 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms