Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Ubqln1Q8R317 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubqln1Q8R317 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.1□□□□□ -0.47
Ubqln1Q8R317 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Ubqln1Q8R317 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ubqln1Q8R317 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ubqln1Q8R317 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ubqln1Q8R317 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ubqln1Q8R317 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.1□□□□□ -0.47
Ubqln1Q8R317 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Gm22121-201ENSMUST00000175148 54 ntBASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Gm19163-201ENSMUST00000223313 780 ntBASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubqln1Q8R317 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.09□□□□□ -0.47
Ubqln1Q8R317 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ubqln1Q8R317 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ubqln1Q8R317 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ubqln1Q8R317 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ubqln1Q8R317 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Gm14704-201ENSMUST00000120300 874 ntBASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Gm16177-201ENSMUST00000120728 718 ntBASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.08□□□□□ -0.48
Ubqln1Q8R317 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.08□□□□□ -0.48
Ubqln1Q8R317 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Gm9899-201ENSMUST00000065519 555 ntBASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubqln1Q8R317 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ubqln1Q8R317 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubqln1Q8R317 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Ubqln1Q8R317 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ubqln1Q8R317 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Ubqln1Q8R317 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ubqln1Q8R317 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubqln1Q8R317 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ubqln1Q8R317 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubqln1Q8R317 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms