Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nudcd3Q8R1N4 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Nudcd3Q8R1N4 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.72□□□□□ -0.37
Nudcd3Q8R1N4 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nudcd3Q8R1N4 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Nudcd3Q8R1N4 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.72□□□□□ -0.37
Nudcd3Q8R1N4 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nudcd3Q8R1N4 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.72□□□□□ -0.37
Nudcd3Q8R1N4 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nudcd3Q8R1N4 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Nudcd3Q8R1N4 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nudcd3Q8R1N4 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nudcd3Q8R1N4 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nudcd3Q8R1N4 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nudcd3Q8R1N4 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nudcd3Q8R1N4 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Gm13616-201ENSMUST00000120600 222 ntBASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nudcd3Q8R1N4 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Nudcd3Q8R1N4 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nudcd3Q8R1N4 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.71□□□□□ -0.38
Nudcd3Q8R1N4 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.71□□□□□ -0.38
Nudcd3Q8R1N4 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Nudcd3Q8R1N4 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nudcd3Q8R1N4 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nudcd3Q8R1N4 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nudcd3Q8R1N4 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.71□□□□□ -0.38
Nudcd3Q8R1N4 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nudcd3Q8R1N4 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nudcd3Q8R1N4 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.71□□□□□ -0.38
Nudcd3Q8R1N4 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Nudcd3Q8R1N4 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Gm27989-201ENSMUST00000184721 107 ntBASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Gm28760-201ENSMUST00000185995 736 ntBASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Gm43575-201ENSMUST00000196420 516 ntBASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Gm6458-201ENSMUST00000211573 635 ntBASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nudcd3Q8R1N4 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms