Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Zcchc9Q8R1J3 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.74□□□□□ -0.37
Zcchc9Q8R1J3 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zcchc9Q8R1J3 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Zcchc9Q8R1J3 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.74□□□□□ -0.37
Zcchc9Q8R1J3 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Zcchc9Q8R1J3 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.74□□□□□ -0.37
Zcchc9Q8R1J3 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zcchc9Q8R1J3 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Zcchc9Q8R1J3 Gm30285-201ENSMUST00000214614 422 ntBASIC12.74□□□□□ -0.37
Zcchc9Q8R1J3 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zcchc9Q8R1J3 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.74□□□□□ -0.37
Zcchc9Q8R1J3 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Zcchc9Q8R1J3 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Zcchc9Q8R1J3 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Zcchc9Q8R1J3 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zcchc9Q8R1J3 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zcchc9Q8R1J3 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Zcchc9Q8R1J3 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Zcchc9Q8R1J3 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Zcchc9Q8R1J3 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zcchc9Q8R1J3 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Zcchc9Q8R1J3 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zcchc9Q8R1J3 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zcchc9Q8R1J3 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zcchc9Q8R1J3 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zcchc9Q8R1J3 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zcchc9Q8R1J3 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zcchc9Q8R1J3 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zcchc9Q8R1J3 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.72□□□□□ -0.37
Zcchc9Q8R1J3 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Zcchc9Q8R1J3 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zcchc9Q8R1J3 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zcchc9Q8R1J3 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.72□□□□□ -0.37
Zcchc9Q8R1J3 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Zcchc9Q8R1J3 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zcchc9Q8R1J3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.72□□□□□ -0.37
Zcchc9Q8R1J3 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zcchc9Q8R1J3 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zcchc9Q8R1J3 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zcchc9Q8R1J3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zcchc9Q8R1J3 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Zcchc9Q8R1J3 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Zcchc9Q8R1J3 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Zcchc9Q8R1J3 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.72□□□□□ -0.37
Zcchc9Q8R1J3 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zcchc9Q8R1J3 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zcchc9Q8R1J3 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Zcchc9Q8R1J3 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
Zcchc9Q8R1J3 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zcchc9Q8R1J3 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Zcchc9Q8R1J3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Zcchc9Q8R1J3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Zcchc9Q8R1J3 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Zcchc9Q8R1J3 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms