Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml1Q8K558 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.53□□□□□ -0.4
Treml1Q8K558 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml1Q8K558 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml1Q8K558 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml1Q8K558 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml1Q8K558 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.53□□□□□ -0.4
Treml1Q8K558 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml1Q8K558 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml1Q8K558 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
Treml1Q8K558 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.53□□□□□ -0.4
Treml1Q8K558 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml1Q8K558 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml1Q8K558 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml1Q8K558 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml1Q8K558 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Treml1Q8K558 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Treml1Q8K558 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.53□□□□□ -0.4
Treml1Q8K558 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml1Q8K558 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml1Q8K558 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml1Q8K558 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.53□□□□□ -0.4
Treml1Q8K558 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Treml1Q8K558 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml1Q8K558 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml1Q8K558 Gm17420-201ENSMUST00000164753 153 ntBASIC12.53□□□□□ -0.4
Treml1Q8K558 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Treml1Q8K558 Gm38002-201ENSMUST00000193255 180 ntBASIC12.53□□□□□ -0.4
Treml1Q8K558 Gm38092-201ENSMUST00000195600 653 ntBASIC12.53□□□□□ -0.4
Treml1Q8K558 Gm18054-201ENSMUST00000207539 555 ntBASIC12.53□□□□□ -0.4
Treml1Q8K558 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.53□□□□□ -0.4
Treml1Q8K558 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml1Q8K558 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Treml1Q8K558 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.53□□□□□ -0.4
Treml1Q8K558 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml1Q8K558 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml1Q8K558 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml1Q8K558 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.53□□□□□ -0.4
Treml1Q8K558 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.53□□□□□ -0.4
Treml1Q8K558 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml1Q8K558 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml1Q8K558 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml1Q8K558 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml1Q8K558 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml1Q8K558 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml1Q8K558 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Treml1Q8K558 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Treml1Q8K558 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Treml1Q8K558 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.52□□□□□ -0.4
Treml1Q8K558 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Treml1Q8K558 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Treml1Q8K558 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Treml1Q8K558 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.52□□□□□ -0.41
Treml1Q8K558 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml1Q8K558 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Treml1Q8K558 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml1Q8K558 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml1Q8K558 Gm42693-201ENSMUST00000196779 631 ntBASIC12.52□□□□□ -0.41
Treml1Q8K558 Gm43438-201ENSMUST00000198133 379 ntBASIC12.52□□□□□ -0.41
Treml1Q8K558 Gm8099-201ENSMUST00000200510 742 ntBASIC12.52□□□□□ -0.41
Treml1Q8K558 Gm43630-201ENSMUST00000201550 776 ntBASIC12.52□□□□□ -0.41
Treml1Q8K558 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.52□□□□□ -0.41
Treml1Q8K558 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.52□□□□□ -0.41
Treml1Q8K558 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml1Q8K558 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml1Q8K558 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml1Q8K558 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Treml1Q8K558 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml1Q8K558 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml1Q8K558 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Treml1Q8K558 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml1Q8K558 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Treml1Q8K558 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Treml1Q8K558 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
Treml1Q8K558 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml1Q8K558 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Treml1Q8K558 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Treml1Q8K558 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml1Q8K558 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml1Q8K558 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml1Q8K558 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.51□□□□□ -0.41
Treml1Q8K558 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml1Q8K558 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml1Q8K558 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Treml1Q8K558 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Treml1Q8K558 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml1Q8K558 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Treml1Q8K558 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.51□□□□□ -0.41
Treml1Q8K558 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml1Q8K558 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Treml1Q8K558 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.51□□□□□ -0.41
Treml1Q8K558 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.51□□□□□ -0.41
Treml1Q8K558 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.51□□□□□ -0.41
Treml1Q8K558 Gm38158-201ENSMUST00000194617 339 ntBASIC12.51□□□□□ -0.41
Treml1Q8K558 Gm18584-201ENSMUST00000203098 964 ntBASIC12.51□□□□□ -0.41
Treml1Q8K558 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Treml1Q8K558 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.51□□□□□ -0.41
Treml1Q8K558 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml1Q8K558 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml1Q8K558 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms